Gene Dgeo_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0036 
Symbol 
ID4057002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp33677 
End bp34561 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content65% 
IMG OID641229032 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_603508 
Protein GI94984144 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID[TIGR03381] N-carbamoylputrescine amidase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAA CTGTGAAGCT CGCCGTCGTG CAGATGCACG TGACCGATCA GCTCGAGGAC 
AACGTGAGCC GCGCCGAGGC GCATGTGCGC GACGCCGCGC GGGCAGGCGC GCAGGTCATC
TTGCTGCCCG AACTCTTCGA AAATCTGTAC TTCTGCCAGG TGGAACGTGA GGACTACTTC
GCGTTGGCGC ATCCTCTCGA GGGACATCCC TTTATCGGGC GCTTTCAGAA CCTGGCGCGG
GAATACGGTG TGGTGCTGCC CCTGTCGTAC TTCGAGCGAG CGGGCCAGGC CCACTACAAC
TCGCTGGTGT GCATCGACGC GGACGGCAGC CTGCTGGGCA ACTACCGCAA GACCCACATC
CCCGACGGTC CCGGCTACGA GGAGAAGTAC TACTTCAACC CCGGTGATAC CGGCTTCAAG
GTCTGGCCGA CCCGTTACGG ACGTGTGGGC GTAGGCATCT GCTGGGACCA GTGGTACCCC
GAGACCGCCC GCGCCCTGAT GCTCCAGGGA GCCGACTTTC TGCTGTACCC CACCGCGATT
GGGTCCGAGC CGGCCGAGGT CGAAAGCCCC AACAACCACT CGATGTGGCA GCGCGCGATG
CAGGGCCACG CCGTCAGCAA CTCCACCTAC GTGGGCGCGG CCAACCGCAT CGGGACCGAG
GTGGTGGTTG ACCTGACCCA GACCTACTAC GGCCACTCCT TTATCTGCGA CTATACCGGC
GAGATCGTGG CCGAGTTCGG GGAGACGGAG GAAGGTCCCC TGCTCCACGA CCTCAACCTG
GCCGAGGCCC GCAAGTTTCG TGCCGGCATG GGTTTTTTCC GGGACCGCCG CCCCGACCTG
TACGGCCCAC TGCTGACGAC GGACGGGGTG ACGCGGCGGG GGTGA
 
Protein sequence
MTQTVKLAVV QMHVTDQLED NVSRAEAHVR DAARAGAQVI LLPELFENLY FCQVEREDYF 
ALAHPLEGHP FIGRFQNLAR EYGVVLPLSY FERAGQAHYN SLVCIDADGS LLGNYRKTHI
PDGPGYEEKY YFNPGDTGFK VWPTRYGRVG VGICWDQWYP ETARALMLQG ADFLLYPTAI
GSEPAEVESP NNHSMWQRAM QGHAVSNSTY VGAANRIGTE VVVDLTQTYY GHSFICDYTG
EIVAEFGETE EGPLLHDLNL AEARKFRAGM GFFRDRRPDL YGPLLTTDGV TRRG