Gene Dgeo_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0012 
Symbol 
ID4058727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp13036 
End bp13686 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content68% 
IMG OID641229009 
Producthypothetical protein 
Protein accessionYP_603485 
Protein GI94984121 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAAC TGGAAGTGCC GCGTGTCACG CTCCAGACCG GGCTGCATGT CCTCGACCTG 
CTGGGCGTGC TGGCCTTTAG CATGTCGGGC GCGCTGCTGG CTGTCCGCAA ACGGTTCGAC
CTCTTCGGCG TGCTGGTGCT GGGCTGCGTG ACGGCGGTGG GCGGCGGGGC CATCCGCGAC
ACCCTGACCG GACAGACGCC CCCGCTGTTT TTGCGCGACG AGACGTATCT GTGGTTCGCG
CTGCTGGGGT CCGTGCTGGC TTTCGCCTTT GGGGAACGCC TCGCCCGCTT CGAGCGCACC
CTGAGCGTGT TCGACACGCT GGGCCTGGCC CTGTTTGCCG CGTCTGGAGC GCTGGGCGCG
CTGAATTTTG GACTCGGACC TCTAGGGGTG ATCTTCGCGG GGATGCTCAG CGGCGTGGGT
GGCGGCGTGA TCCGCGACCT GATCGCCAAT GAGGTGCCCG AGATCATGTA CCGCCATGAC
CAGCTCTATG CCACCGCTGC CGCCGCCGGA GCCGCCGCCG TCTATCTCCT CCACCCGGTT
CTCACGCCCT TTCAGACCCA GCTTGCCGGA GCGCTGATCG TCATGCTGCT GCGCTGGCTC
TCGCGCCGGG GCTGGGTCAG ATTGCCGGTG CGGCGGCTGC CGGGAGAGTG A
 
Protein sequence
MHELEVPRVT LQTGLHVLDL LGVLAFSMSG ALLAVRKRFD LFGVLVLGCV TAVGGGAIRD 
TLTGQTPPLF LRDETYLWFA LLGSVLAFAF GERLARFERT LSVFDTLGLA LFAASGALGA
LNFGLGPLGV IFAGMLSGVG GGVIRDLIAN EVPEIMYRHD QLYATAAAAG AAAVYLLHPV
LTPFQTQLAG ALIVMLLRWL SRRGWVRLPV RRLPGE