Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_0003 |
Symbol | |
ID | 4057130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | + |
Start bp | 2025 |
End bp | 3107 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641229000 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_603476 |
Protein GI | 94984112 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000103313 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGCGC ATGTCACCAA GAAAACCCTG AGCGAAGGTC TTGGCCTTCT TGAACGTGTC ATCCCTAGCC GCAGCAGCAA CCCACTCCTT ACCGCCCTCA AGGTCGAGGC TTCCGAAGCA GGTCTGACCC TCAGCGGGAC GAACCTCGAA ATCGACCTGT CCTATTTTGT GCCAGCAGAG GTGCAAGCTC CCCAGAGCTT TGTGATCCCC GCCCACCTGT TCGCACAGAT TGTGCGGAAT TTGGGGGGAG AATTGGTGGA GCTTGAACTC ACCGGAGGAG AACTGTCAGT GCGGGCGGGC GGAAGCGATT TCAAGCTTCA GACCGGGGAT CTGGAGGCGT ACCCACCGCT CTCTTTTCCC ACGCACACCG ACGTGAGCCT GGACGCCGCT GAGCTGGCCC GCGCCTTGGG CAGCGTGCGC TATGCGGCCA GCAACGAGGC GTTTCAAGCT GTCTTCCGCG GCATCAAGCT GGAACACCGG CCCGCGTCAG CCCGCGTGGT GGCTTCCGAT GGCTACCGGG TCGCCATCCG CGACTTTCCA GCAAGCGGTG ATGGACGCAA TCTGATTGTG CCTGCCCGCA GCGCTGACGA ACTGATCCGG GTGCTGAAAG ACGGCGAGGC TCGTTTCACC TATGGCGAGG GACTCCTGAG CGTCACCACC GACCGTGTGC GCATGAATCT CAAGCTGCTT GACGGCGAGT TTCCCGATTA CGAGCGCGTC ATTCCCAAAG ATGTCAAACT TCAGGTCACG CTGCCTGCCA CCGCTCTCAA GGAGGCCGTG GGCCGTGTGG CGGTGCTGGC CGACAAGAAT GCGAACAACC GAGTCGAATT CCTGGTCTCA GAAGGCAAGC TGCGCTTGGC CGCCGAGGGC GACTATGGCC GCGCGCAGGA CACGCTGGAT GTGGTGCAGG GTGGAGCCGA ACCAGCGATG AGCCTCGCGT TCAATGCCCG GCATGTCCTG GATGCCTTGG GACCGATTGA GGGCGACGCG GAACTCCTCT TCTCCGGCTC GACCAGCCCC GCTATCTTCC GCGCGAGCGG GGGGGGCGAC TACATGGCCG TCATGGTCAC GCTACGCGTT TAA
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Protein sequence | MRAHVTKKTL SEGLGLLERV IPSRSSNPLL TALKVEASEA GLTLSGTNLE IDLSYFVPAE VQAPQSFVIP AHLFAQIVRN LGGELVELEL TGGELSVRAG GSDFKLQTGD LEAYPPLSFP THTDVSLDAA ELARALGSVR YAASNEAFQA VFRGIKLEHR PASARVVASD GYRVAIRDFP ASGDGRNLIV PARSADELIR VLKDGEARFT YGEGLLSVTT DRVRMNLKLL DGEFPDYERV IPKDVKLQVT LPATALKEAV GRVAVLADKN ANNRVEFLVS EGKLRLAAEG DYGRAQDTLD VVQGGAEPAM SLAFNARHVL DALGPIEGDA ELLFSGSTSP AIFRASGGGD YMAVMVTLRV
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