| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_0003 |
|---|
| Symbol | |
|---|
| ID | 4057130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | + |
|---|
| Start bp | 2025 |
|---|
| End bp | 3107 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641229000 |
|---|
| Product | DNA polymerase III, beta subunit |
|---|
| Protein accession | YP_603476 |
|---|
| Protein GI | 94984112 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
|---|
| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000103313 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCGC ATGTCACCAA GAAAACCCTG AGCGAAGGTC TTGGCCTTCT TGAACGTGTC
ATCCCTAGCC GCAGCAGCAA CCCACTCCTT ACCGCCCTCA AGGTCGAGGC TTCCGAAGCA
GGTCTGACCC TCAGCGGGAC GAACCTCGAA ATCGACCTGT CCTATTTTGT GCCAGCAGAG
GTGCAAGCTC CCCAGAGCTT TGTGATCCCC GCCCACCTGT TCGCACAGAT TGTGCGGAAT
TTGGGGGGAG AATTGGTGGA GCTTGAACTC ACCGGAGGAG AACTGTCAGT GCGGGCGGGC
GGAAGCGATT TCAAGCTTCA GACCGGGGAT CTGGAGGCGT ACCCACCGCT CTCTTTTCCC
ACGCACACCG ACGTGAGCCT GGACGCCGCT GAGCTGGCCC GCGCCTTGGG CAGCGTGCGC
TATGCGGCCA GCAACGAGGC GTTTCAAGCT GTCTTCCGCG GCATCAAGCT GGAACACCGG
CCCGCGTCAG CCCGCGTGGT GGCTTCCGAT GGCTACCGGG TCGCCATCCG CGACTTTCCA
GCAAGCGGTG ATGGACGCAA TCTGATTGTG CCTGCCCGCA GCGCTGACGA ACTGATCCGG
GTGCTGAAAG ACGGCGAGGC TCGTTTCACC TATGGCGAGG GACTCCTGAG CGTCACCACC
GACCGTGTGC GCATGAATCT CAAGCTGCTT GACGGCGAGT TTCCCGATTA CGAGCGCGTC
ATTCCCAAAG ATGTCAAACT TCAGGTCACG CTGCCTGCCA CCGCTCTCAA GGAGGCCGTG
GGCCGTGTGG CGGTGCTGGC CGACAAGAAT GCGAACAACC GAGTCGAATT CCTGGTCTCA
GAAGGCAAGC TGCGCTTGGC CGCCGAGGGC GACTATGGCC GCGCGCAGGA CACGCTGGAT
GTGGTGCAGG GTGGAGCCGA ACCAGCGATG AGCCTCGCGT TCAATGCCCG GCATGTCCTG
GATGCCTTGG GACCGATTGA GGGCGACGCG GAACTCCTCT TCTCCGGCTC GACCAGCCCC
GCTATCTTCC GCGCGAGCGG GGGGGGCGAC TACATGGCCG TCATGGTCAC GCTACGCGTT
TAA
|
|---|
| Protein sequence | MRAHVTKKTL SEGLGLLERV IPSRSSNPLL TALKVEASEA GLTLSGTNLE IDLSYFVPAE
VQAPQSFVIP AHLFAQIVRN LGGELVELEL TGGELSVRAG GSDFKLQTGD LEAYPPLSFP
THTDVSLDAA ELARALGSVR YAASNEAFQA VFRGIKLEHR PASARVVASD GYRVAIRDFP
ASGDGRNLIV PARSADELIR VLKDGEARFT YGEGLLSVTT DRVRMNLKLL DGEFPDYERV
IPKDVKLQVT LPATALKEAV GRVAVLADKN ANNRVEFLVS EGKLRLAAEG DYGRAQDTLD
VVQGGAEPAM SLAFNARHVL DALGPIEGDA ELLFSGSTSP AIFRASGGGD YMAVMVTLRV
|
|---|
| |