| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2828 |
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| Symbol | |
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| ID | 4074057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008010 |
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| Strand | + |
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| Start bp | 197949 |
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| End bp | 199481 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641228652 |
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| Product | glycoside hydrolase, clan GH-D |
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| Protein accession | YP_594331 |
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| Protein GI | 94972291 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.816401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCTG AGCGGTCCTG GACCCTGCCC ATCTCCCCTC ATGAACTGCG GGTTCTCGTG
AACGGCTACC AGTCGTGGAG CGAGGCGGAG CTGCGGGCGC TGCTGGACAC GCCGCAGCGC
GCGCTGTTTT CGTGGATGAT CGAGCAGGGG CAAGATCCGG TCTTTCCCCC CAGCGGGGAG
GCGGGCGTAT GGCGTTCGCA CACCCTGATC GCCCTGATTC GCCCGGATGG GGGCGGCTGG
GTGGGCTGTC TTCAAGATGC CCGGCAGACC TTTGCTCACT GGGAGGCGCG GGCGGTGGGG
GGGCAGGTGG AGCTGAGCTG CACCTTGGAG GGTCCCCCAG CGGAGGTGGC CTTTGAGGAG
ACCGAGGACG TGATCACAAC CGTCGAAACC CTCACGGCAC GATTGGGAAC GGTGATGCAG
GCCCGGACCC CGCCGCCCCT GCGGGTGTGG TGCAGTTGGT ACAGCTACTA CCGGGACGTG
ACGCTCGCCG CGATGCTGGA CAATGCCCGG CTCGCCCGCG AGTTGGCGCT GCCTTTCGAT
GTGTTTCAGC TGGACGACGG CTTTCAGGCA GATTTGGGCG ACTGGTTGGA GCCTAGCGCC
TGGTTCGGGG GTCATGCGAA GGACCTTCCG GCGCAGCTCA AAGAACTCGG CTTCCGGGCT
GGGTTGTGGT TGGCTCCCTT TTTGGTGGGT CCGCGCTCGC GGCTGCGGGC GCAGCAGCCA
GAGTGGCTGC TGCGCGGTGC GGACGGGGAG CCGCTGCTGG CAGGGCACAA CTGGGGCGGT
CCCTACCACG TGCTGGACAC CACCCACCCC GAGGTGCTGG CGTGGCTGCG TGACCTGGCG
GCCACTGTGC GGGGGTGGGG CTACACGTAT CTGAAGCTGG ACTTTCTGTA CGGGGCTGCG
CTGCCCGGGG TGCGGTATGA CCCAGCGGTG AGCCGGGCTG CGGCCTACCG GCAGGGTGTG
CAGGCGCTGC GGGATGGGGC GGGCGAGGAG ACCTTCCTGC TGGGGTGTGG GGCGCCCCTT
GCGAGCAGCA TCGGGCTGGT GGACGCGATG CGGACCGGGC CGGACGTGAC GCCCTTTTGG
GACGACGAGG CGCGGCGGGT GCTGCTGGGG GACGGGGCGG TGCCCAGCAC GCGTAGCGTG
CTGCACACGG CCCTGTCGCG CTGGTACCAG CATGCCTGGT ACCAGCCTGA CCCGGATGTG
ATGATTGCCC GGCGGGAACT GAGTCTGCTG GGGGAACACG AGCGCGGCGC CCTGCTTGGC
CTGCTCGACG TGATTGGTGG CCTGCGGGCG AGCAGCGATC CCATCCGGCT GCTGGACGAG
GCGGGACGGG CGCTGCTGCG GCAGAGCCTG CAGCTCAGCC GCCCGGATCG GCCCCGGACG
CTGACGACGA GTTACGGCGG AGCGGTGACC CACTTCACGC GGGGCACCTT TAACCTGCTG
GATGTGCCTG CGGGTGGCCT GGCGCCGCAC AGTTACAGCG CGGCCCAGGT TGGGGGTCTC
CAGCCCCTTC TCGCCCGCCA CCAGCAGACC TAG
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| Protein sequence | MTSERSWTLP ISPHELRVLV NGYQSWSEAE LRALLDTPQR ALFSWMIEQG QDPVFPPSGE
AGVWRSHTLI ALIRPDGGGW VGCLQDARQT FAHWEARAVG GQVELSCTLE GPPAEVAFEE
TEDVITTVET LTARLGTVMQ ARTPPPLRVW CSWYSYYRDV TLAAMLDNAR LARELALPFD
VFQLDDGFQA DLGDWLEPSA WFGGHAKDLP AQLKELGFRA GLWLAPFLVG PRSRLRAQQP
EWLLRGADGE PLLAGHNWGG PYHVLDTTHP EVLAWLRDLA ATVRGWGYTY LKLDFLYGAA
LPGVRYDPAV SRAAAYRQGV QALRDGAGEE TFLLGCGAPL ASSIGLVDAM RTGPDVTPFW
DDEARRVLLG DGAVPSTRSV LHTALSRWYQ HAWYQPDPDV MIARRELSLL GEHERGALLG
LLDVIGGLRA SSDPIRLLDE AGRALLRQSL QLSRPDRPRT LTTSYGGAVT HFTRGTFNLL
DVPAGGLAPH SYSAAQVGGL QPLLARHQQT
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