| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2825 |
|---|
| Symbol | |
|---|
| ID | 4074054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008010 |
|---|
| Strand | - |
|---|
| Start bp | 201892 |
|---|
| End bp | 202842 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641228655 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_594328 |
|---|
| Protein GI | 94972288 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.223477 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACACCC TGAAGCGTCT GGCTGTCCTT TCCGCGTTGC TGGCTGGGTC CCTCGCGCTC
GCACAGGCAA AGCAGGTGAT TGGCGTTTCG ATTCCCGCCG CCGACCACGG CTGGACAGCG
GGCGTTGTGT ACCACGCCAA TGAGGCCAAG AAAGCCCTGG AGCAGAAGTA CCCGAACGTC
CAGATCATCG TGAAGACGGC CAAGGACAGC AATGAGCAGG CCAACCAGAT TCAGGACCTT
TACACCGTGA ACAAGATCAA CGCACTGGTG ATCCTGCCGC TGGAGAGCGC GCCACTGACT
CGCCCGGTGG CCAACCTGAA GTCGAAGGGC GTCTTCGTGA CGGTGGTGGA CCGCGGCCTG
ACCGATCCGG GGGCGCAAGA CGCCTACGTG GCCGGGGACA ACACCGCCTT CGGGCGAGTG
GCCGGGCAGT ACTTCGCGCA GCGGCTCGGC GCGCAGGGCG GCAACGTGGT GGTGCTGCGC
GGCATTCCCA CCGTGATCGA CAACGAGCGG GTGGCCGCCT TCAACGCGGC GGTGGCGAAA
AATCCCAAGA TCAAGGTGCT GGATGCCCGC TATGGCAACT GGAACCGCGA CGACGCCTTT
CAAGTGATGC AGGATTACCT CACGCGCTTT CCCAAGATCG ACGCCGTGTG GGCGAGCGAC
GACGACATGG CCGTCGGTGT GCTGCGTGCC CTTCAGCAGG CCGGCCGCAA GGACATCAAG
TTCGTGGTGG GCGGCGGAGG CATGAAGGAC ATGATCAAGC GGGTGATGAA CGGCGACGCG
TTGGTTCCCG TCGATGTCAC CTATCCGCCC AGCATGATCG CGGACGCCAT GCGGCTCACG
GTGGAAAGCC GCGTCACCGG CAAACCGCTG AAGGCCAAGA CCATCATTCC CTCCGTGCTC
GTCACCAAGA GCAACGCGCG GCAGTTCTAC TACCCCAACT CGCCCTTCTG A
|
|---|
| Protein sequence | MHTLKRLAVL SALLAGSLAL AQAKQVIGVS IPAADHGWTA GVVYHANEAK KALEQKYPNV
QIIVKTAKDS NEQANQIQDL YTVNKINALV ILPLESAPLT RPVANLKSKG VFVTVVDRGL
TDPGAQDAYV AGDNTAFGRV AGQYFAQRLG AQGGNVVVLR GIPTVIDNER VAAFNAAVAK
NPKIKVLDAR YGNWNRDDAF QVMQDYLTRF PKIDAVWASD DDMAVGVLRA LQQAGRKDIK
FVVGGGGMKD MIKRVMNGDA LVPVDVTYPP SMIADAMRLT VESRVTGKPL KAKTIIPSVL
VTKSNARQFY YPNSPF
|
|---|
| |