Gene Dgeo_2824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2824 
Symbol 
ID4074053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008010 
Strand
Start bp202924 
End bp203964 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content69% 
IMG OID641228656 
Productinner-membrane translocator 
Protein accessionYP_594327 
Protein GI94972287 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.45779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTCGAG GAGGGCGCAG TACGGGAGTC GAGCGGGGGC CGCCGGCCGG TTGGCCTGCG 
CCTGAGGCCC CAGCTCGGGG CTCTTGTGGG CATCGACCTT GGGGCAACGA GCGTGGATGT
GGTTCTGTGC AGCGTAGACC TGGCCGTGCT GGGGCGGCGC ACCGCCGCGA CAGACGTGAG
CCGAGGGCCG GGGCCAGTGC TTGCCCAGAT CGAGGCGCTG CTCGACGACC TGCTCACCTG
TCACAGCGTC CCAACGGACC AGGTGTTCGG CCTGGGGATG GGGGTTCCGG GACCGGTGGA
ATTCCATACC GGCCTGCTGA TCAATCCGCC CCTGATGCCG CGCTGGGAGC GGGCGCGGCG
ACCATCGCGC TCGGAATGCT CACGGCGCTG GTGCTGGGTT CGCTGGCGGG CCTCTTCCAC
GGCGTCACCA TCACGCTGGG ACGCATCGAG CCGTTCATCG TCACCCTGGG CACGCTGGGT
ATCTACCGGG CGGTGCTGAC CTATCTCGCG CAGGGGGGCG CGATCTCGCT GGGCCTGGAG
GTGGGGGACC ATTACAGCCC GGTGTACTAC GGCCGCGTGC TGGGCGTGCC CATCCCCATC
CTGATCTTCG CGGCGGTGGC GCTGCTGGGC GGGCTGCTGC TCAACCGCAC CCGCTACGGC
CGTTACGTGC AGGCGATTGG CAGCAACGAA CAGGTCGCGC GTTACGCCGC CATCAACGTG
ACCGGCATCA AGATCGCCAC CTATGTGCTG CTGGGCATCT GTGTGGCACT CGCCACCATC
CTCTACGTGC CGCGCTTGGG CAGCGCCACC CCCGCGACCG GGCTGCTGTG GGAGCTGGAC
GCCATCGCGG CGGTGATCAT CGGCGGGACG GCCCTGAAGG GCGGCGCGGG GCGCATCTGG
GGCACGGTCG TGGGCGCGGT GCTGCTCGTG ACCATCGAGA ACGTCCTGAA CCTCACCAAC
ATCATCAGCG TGTATCTCAA CGCAGCAGTC ACCGGCTTCG TCATCATCCT GGTCGCCTTT
TTGCAGCGCA GCCGCCGCTG A
 
Protein sequence
MARGGRSTGV ERGPPAGWPA PEAPARGSCG HRPWGNERGC GSVQRRPGRA GAAHRRDRRE 
PRAGASACPD RGAARRPAHL SQRPNGPGVR PGDGGSGTGG IPYRPADQSA PDAALGAGAA
TIALGMLTAL VLGSLAGLFH GVTITLGRIE PFIVTLGTLG IYRAVLTYLA QGGAISLGLE
VGDHYSPVYY GRVLGVPIPI LIFAAVALLG GLLLNRTRYG RYVQAIGSNE QVARYAAINV
TGIKIATYVL LGICVALATI LYVPRLGSAT PATGLLWELD AIAAVIIGGT ALKGGAGRIW
GTVVGAVLLV TIENVLNLTN IISVYLNAAV TGFVIILVAF LQRSRR