Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_2778 |
Symbol | |
ID | 4074009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008010 |
Strand | + |
Start bp | 248019 |
End bp | 248780 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641228699 |
Product | IclR family transcriptional regulator |
Protein accession | YP_594284 |
Protein GI | 94972244 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0655324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGGGAA CCCTAGAAAA AGCCGGGCAG GTGCTGGACC TGTATTCGGA TGAGCGGCCG GAGTGGGGAG CGACCGGGGT GGCCGCGGCG CTGGGGATTC CCAAGGCCAG CGCGCACCAC TTGCTCGCCT CGCTGGCCGA GATCGGCCTC CTGCACCGCA CCGCCAATCG GCAATACCGG CTAGGCTTCA AGGCCCTCGT TCTCAGTCGC ATCTTGCTGC GGGCGACCCC GTGGCGCGAG GCGGCCGAGC AGGAGATGCG AACCCTGACG CAGGAGTTCG GCGAGTCGGT GCAACTGGGC TCGCTGGACG GCAACCGCCT GGTGTGCGTG GCCCGGCTGG GCGGGACGCT GCCGGATAGC GTGCATATCG CGGATGTCGG GACGAGCATC CCGCCCCATT GCAGCTCGAA CGGCAAGGTG CTGCTGGCCT TCAGCCCCAG CGAGCGCGCG CTGCCGGTGC TGCAACACCA GGGCCTGACG CGCTTCACCG AGAACACTAT CACCACCCCC GACGAGCTGG CCTCCGAACT GGCGCGCGTT CGCGAGCTGG GCTTCGCTTA CGACGTAGGC GAGTATCGCG ACAACTTCTG TTCTGTCGGC GCCCCGATCC GCAATCACCT TGGCGAGGTG GTGGCGTCCT TGAGCATCGC CACGCCCGCG CGCCGCTTCT ACGAGCGGAA GGCAGCCTAT CGCACGGCGG TTATCCGCGT CACTGAGCGC ATCTCCATGC GGATCGGCTA CAACCCAACG CCGCTCTGGT AG
|
Protein sequence | MLGTLEKAGQ VLDLYSDERP EWGATGVAAA LGIPKASAHH LLASLAEIGL LHRTANRQYR LGFKALVLSR ILLRATPWRE AAEQEMRTLT QEFGESVQLG SLDGNRLVCV ARLGGTLPDS VHIADVGTSI PPHCSSNGKV LLAFSPSERA LPVLQHQGLT RFTENTITTP DELASELARV RELGFAYDVG EYRDNFCSVG APIRNHLGEV VASLSIATPA RRFYERKAAY RTAVIRVTER ISMRIGYNPT PLW
|
| |