Gene Dgeo_2743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2743 
Symbol 
ID4073974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008010 
Strand- 
Start bp283239 
End bp284258 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content64% 
IMG OID641228733 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_594250 
Protein GI94972210 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01123] branched-chain amino acid aminotransferase, group II 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.646855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGA ATATCGATTG GCAGAACCTG GGCTTCAGCT ACATCAAGAC CGACCTGCGC 
TACCGCTCGC ACTGGAAGGA TGGCGAGTGG GACGCAGGGG TGCTCACCGA GGACAACTGC 
GTTCACATCA GCGAGGGCTC GACCGCTCTG CACTACGGGC AGCAGTGCTT TGAGGGTCTC 
AAGGCATACC GCCAGCGCGA TGGGTCGGTG GTCCTCTTTC GCCCCGACCA GAACGCGGCG 
CGGATGCAGG CGAGCTGCGA GCGGCTGCTG ATGCCGACCA TTTCGACCGA GCAGTTCATC 
GCTGCTTGCG TGCAGGTCGT GAAGGCCAAC CTGGACTATC TGCCTCCCTA CGGCACGGGC 
GGCGCCCTCT ACCTGCGGCC CTACATGATC GGTGTGGGCG ACAACCTGGG CGTACGCACC 
GCCCCGGAGT TCCTCTTCTC CGTGTTTTGC GTACCGGTTG GCGCCTACTT TAAGGGCGGC 
CTGACTCCTG CCAACTTTAT CGTTTCGCCC TACGACCGGG CCGCACCCCA CGGCACCGGA 
GCGGCCAAGG TGGGCGGGAA CTATGCTGCG AGCCTCCTCC CCGGCCACCT CGCCAAGGAA 
CGCGGCTTTG CCGACGCGAT CTACCTCGAT CCACAGACCC ATACCAAGAT CGAGGAGGTG 
GGGGCGGCCA ACTTCTTCGC CATCACGCAG GATGACCGCT TCGTCACGCC GCAGTCGCCC 
TCCATCCTCC CCAGCATCAC CAAGTTCTCG CTGCTGCAGC TGGCAAGGGA GCGGCTGGGC 
CTGGAGGTGG AGGAAGGAGA CATCTACATC GATCAGCTCG ACCGGTACAA GGAGGCGGGA 
GCCTGCGGCA CGGCGGCGGT GATCACGCCC ATCGGCGGCA TCCAGTACGG TGACCACTTC 
CACGTCTTTT ACAGTGAAAC GGAGGTCGGC CCGGTGACCC GGCGGCTGTA TGATGAGTTG 
GTTGGCATCC AGTTCGGGGA CATCGCGGCC CCAGAGGGCT GGCTCGTCCG AGTGGAGTAG
 
Protein sequence
MSKNIDWQNL GFSYIKTDLR YRSHWKDGEW DAGVLTEDNC VHISEGSTAL HYGQQCFEGL 
KAYRQRDGSV VLFRPDQNAA RMQASCERLL MPTISTEQFI AACVQVVKAN LDYLPPYGTG 
GALYLRPYMI GVGDNLGVRT APEFLFSVFC VPVGAYFKGG LTPANFIVSP YDRAAPHGTG 
AAKVGGNYAA SLLPGHLAKE RGFADAIYLD PQTHTKIEEV GAANFFAITQ DDRFVTPQSP 
SILPSITKFS LLQLARERLG LEVEEGDIYI DQLDRYKEAG ACGTAAVITP IGGIQYGDHF 
HVFYSETEVG PVTRRLYDEL VGIQFGDIAA PEGWLVRVE