| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2702 |
|---|
| Symbol | |
|---|
| ID | 4073933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008010 |
|---|
| Strand | - |
|---|
| Start bp | 326863 |
|---|
| End bp | 328086 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641228774 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_594209 |
|---|
| Protein GI | 94972169 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4214] ABC-type xylose transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAGCC GAGCGACCTC AGGTCATCTT ACCCGGCGGC CCGGCCTCCT TGACCGGCTT
CAGCTCGATG GCAGACTCGC CTCCCTGCTC CTTGCGATCG CCGTCATGTG GCTTGCTTTT
CACCTCCTCA CGGGCGGCAC CTTCCTCAGC GCCCGCAACC TGTGGAATCT GTCCGTGCAA
ACCGCCTCAG TCGGCGTGAT GGTAGGCGGA ATGGTGCTGG TCATCGTGAT GCGCCACATC
GACCTGTCGG TCGGCTCCAT CCTGGGCCTC ACGGGCATGA TCATGGCCGT CCTGAACGCG
CGCGTCCTGC CTGATACCTC CTGGAGTGGC TGGGCCACGC TGCTTGCCGG TCTCTTGGTT
GGTGCGGCTA TCGGTGCTGT CCAGGGGGCC TGGGTCGCTT ACCTGAATAT TCCTGCCTTC
ATCGTGACGC TGGGGGGGCT TCTGATCTGG CGGGGCTTTG CCTGGATCCT GACATCCGGG
CAGACGGTGG CGCCCCTCAC CGACCGATTC CAGGTCTTCG GAGGCGGGCT GGGCGGTTCC
ATCGGTGGCC CGTGGAGCTG GGCGATCGGC GCTGCCCTGG TGGCCACCGT GGTCGTTTCT
GACCTGCGTA GCTATCGCCG CCGGGCGCGG AGCGGGCTGC CGCAGCGCGA CCCCCTGCTT
CAGGTGCTGG TCACGGCCCT TAGCGTCGCC CTGATCATCG GCTTTATCCT GATTATGGTG
GGGTATCCCG ACCCACGCAC CGGACTTCCC CGCGGAATGC CGGTTCCCGT CCTGATCATG
TTGGCCGTCA CGGCCCTGCT GATGTGGGTC GTGCGCGCTA CGCGCTTTGG GCGGTATGTG
TATGCCTTCG GAGGCAATCC CGAGGCCGCG CGCCTGGCCG GAATCAATAC CGCGCGTCTC
ACCGTGATGG TGTTTGCGCT GATGGGGTTA CTCGCCGCGC TTGCTGGTGC CATCCAGACG
GCCCGACTCA ATGCGGGCAC GAACTCCACG GGCACGTTGG CAGAACTCAG CGTGATTGCT
GCCGCTGTGA TCGGTGGAAC GAGCCTCGGC GGTGGCACGG GGAGCATTCC CGGCGCCTTC
CTCGGAGCGC TGTTCATGGC GAGCCTGATC AACGGTATGC TGCTGCTCGA CCTGTCCAGC
GCCGTTCAGA ATGTCGTGCA AGGCCTCGTG CTGATCCTCG CCGTCACACT CGACACCCTG
TACCGCCGCC GGGGCGTGCG GTGA
|
|---|
| Protein sequence | MQSRATSGHL TRRPGLLDRL QLDGRLASLL LAIAVMWLAF HLLTGGTFLS ARNLWNLSVQ
TASVGVMVGG MVLVIVMRHI DLSVGSILGL TGMIMAVLNA RVLPDTSWSG WATLLAGLLV
GAAIGAVQGA WVAYLNIPAF IVTLGGLLIW RGFAWILTSG QTVAPLTDRF QVFGGGLGGS
IGGPWSWAIG AALVATVVVS DLRSYRRRAR SGLPQRDPLL QVLVTALSVA LIIGFILIMV
GYPDPRTGLP RGMPVPVLIM LAVTALLMWV VRATRFGRYV YAFGGNPEAA RLAGINTARL
TVMVFALMGL LAALAGAIQT ARLNAGTNST GTLAELSVIA AAVIGGTSLG GGTGSIPGAF
LGALFMASLI NGMLLLDLSS AVQNVVQGLV LILAVTLDTL YRRRGVR
|
|---|
| |