| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2627 |
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| Symbol | gltD |
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| ID | 4073858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008010 |
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| Strand | - |
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| Start bp | 417904 |
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| End bp | 419370 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641228848 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_594135 |
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| Protein GI | 94972095 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGAAAG TCACCGGCTT TCTGGAATAC CGGCGTGTGA AAGAGGCGTA CGAGCCGATC
GACGAGCGCC TGAAGAACTA CAAGGAATTC GTTCACGAAC TGACGGTTGA GCAGGCGCGG
ATGCAGGGCG CGCGGTGCAT GGACTGCGGC ATCCCTTTTT GCAACAATGG CTGCCCGGTC
AACAACCTGA TCCCGGACTG GAACGATCTG GTGTACCGCG ATGACTGGCG CAGCGCCATC
GACACCCTGC ACGCCACCAA CAACTTTCCG GAATTCACCG GGCGCGTGTG TCCAGCTCCC
TGTGAGGCGG CCTGCACCCT GAACCTCACC GACGAGCCGG TGGGCATCAA GTCCATCGAG
CGCGCGATCA TCGACCGGGC CTGGCGCGAG GGCTGGGTTG CGCCTCAGCC GCCCCCCTTC
AAAACGGGCA AACGGGTCGC GGTCGTCGGC TCTGGGCCGG CGGGTCTTGC GGCAGCGCAG
CAACTGGCGC GGGCTGGCCA CGACGTGACG GTCTTTGAGA AGAACGACCG GGTGGGCGGC
CTGCTGCGCT ACGGTATTCC TGACTTCAAG CTGGACAAGA GCCTGATCGA TCGCCGCGTG
GCGCAGATGG AGGCCGAAGG GGTCACGTTC CGCACCGGGG TTCTGGTGGG CACGCTTCCC
GAAGCGTCGA AGGTGAGTAA CCTGTCGCGT GAGACGGTCT CGCCGGAGGA GCTGACCCAG
ACTTTCGATG CGGTGCTGTT GGCGGGCGGC GCCGAGCAGC CACGCGACCT GCCGGTGCCG
GGGCGCGACC TCGCAGGAAT CCACTTCGCT ATGGAATTCC TCCCCGGGCA GAACCGGGTG
AACGCGGGCG ATACGCTGGA GGAGCAAATT CACGCCGGGG GCAAGCATGT GATCGTGATC
GGTGGCGGCG ACACTGGGGC CGACTGTGTG GGCACGTCCA ATCGGCAGGG CGCGGCCAGC
GTCACGCAGT TCGAGCTGCT GCCGATGCCG CCCGAGCGCG AGAACAAGGC CCTCACCTGG
CCCTACTGGC CCCTCAAGCT CCGCACGTCC TCCAGCCACG AGGAAGGCTG CCAGCGCGAG
TTCGCCATCG CCACCAAGGC GTTCCTGGGC GAAGCTGGCC GGGTCACGGC GGTCCGCACG
GTGCGCCTGA GCTGGGAAGG CGGCAAGATG ACCGAGATTC CCGGCAGCGA GGAAGTGTTG
CCCGCTGACC TGGTGCTGCT GGCGATGGGC TTTGTGGGCC CAGTGGGAAG TATCCTCGAG
GCTTTCGGCG TGAACCGGGA CGCGCGGGGC AACGCCCAGG CCTCCACCGA CGAGGTGGGC
GGCTACGCAA CCAACGTCCC AAAGGTGTTT GCGGCGGGCG ATATGCGCCG GGGCCAATCG
CTGGTCGTCT GGGCCATCCG CGAGGGGCGT CAGGCCGCCC GCGCGGTGGA CGAATTCCTG
ATGGGCATCA GCGATCTGCC GCGCTGA
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| Protein sequence | MGKVTGFLEY RRVKEAYEPI DERLKNYKEF VHELTVEQAR MQGARCMDCG IPFCNNGCPV
NNLIPDWNDL VYRDDWRSAI DTLHATNNFP EFTGRVCPAP CEAACTLNLT DEPVGIKSIE
RAIIDRAWRE GWVAPQPPPF KTGKRVAVVG SGPAGLAAAQ QLARAGHDVT VFEKNDRVGG
LLRYGIPDFK LDKSLIDRRV AQMEAEGVTF RTGVLVGTLP EASKVSNLSR ETVSPEELTQ
TFDAVLLAGG AEQPRDLPVP GRDLAGIHFA MEFLPGQNRV NAGDTLEEQI HAGGKHVIVI
GGGDTGADCV GTSNRQGAAS VTQFELLPMP PERENKALTW PYWPLKLRTS SSHEEGCQRE
FAIATKAFLG EAGRVTAVRT VRLSWEGGKM TEIPGSEEVL PADLVLLAMG FVGPVGSILE
AFGVNRDARG NAQASTDEVG GYATNVPKVF AAGDMRRGQS LVVWAIREGR QAARAVDEFL
MGISDLPR
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