Gene Dgeo_2568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2568 
Symbol 
ID4073799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008010 
Strand+ 
Start bp485135 
End bp485668 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content71% 
IMG OID641228907 
Producturacil-DNA glycosylase superfamily protein 
Protein accessionYP_594076 
Protein GI94972036 
COG category[L] Replication, recombination and repair 
COG ID[COG3663] G:T/U mismatch-specific DNA glycosylase 
TIGRFAM ID[TIGR00584] mismatch-specific thymine-DNA glycosylate (mug) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACGGG ACACAGCGGG TGCCCCCGTG CTCCAGGACC TGGTGGCCGA AGGCGTGCAG 
GTGCTGTTCG TAGGCTTCAA CCCCAGCCCA CGCTCGGTGC AGCAGGGGCA CCACTACGCC 
GGGCGCGGCA ACCAGTTCTG GCGGCTGCTG GCGGCTTCGG GCCTCACGCC CCGGCTGCTG 
CGGCCCGAGG AAGACCACCT GCTGCCCCGC TGGGGCCTGG GATCCACCAA CCTGGTGGCG 
CGCCCGACCG TCAGCGCCGC CGAACTGAGC CGTTCGGAAC TCCGCGCGGG TGTCCCGCAC 
CTGCGCCGTC TCGTGGCGAG GTACCAGGTT CCCCTCGTCG CCTACACCGG GAAGGGGGTG 
TACCTCGCCG CGACGGGAAA ACAGCAAGCC CACTGGGGCG CCCAGGAGGA CAGCTTGATT 
GGGGGAGTGA CGGACTTCGT GCTGCCGTCG CCGAGCGGTC TGGCGCGGCT GCCGTTCGCG 
GAGAAGCTCG GGTACTACCG TGCGCTGGCG GAACTGGCCC AGCAGCCAGG GTGA
 
Protein sequence
MTRDTAGAPV LQDLVAEGVQ VLFVGFNPSP RSVQQGHHYA GRGNQFWRLL AASGLTPRLL 
RPEEDHLLPR WGLGSTNLVA RPTVSAAELS RSELRAGVPH LRRLVARYQV PLVAYTGKGV 
YLAATGKQQA HWGAQEDSLI GGVTDFVLPS PSGLARLPFA EKLGYYRALA ELAQQPG