Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_2542 |
Symbol | |
ID | 4073773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008010 |
Strand | + |
Start bp | 505665 |
End bp | 507044 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641228933 |
Product | MATE efflux family protein |
Protein accession | YP_594050 |
Protein GI | 94972010 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAACG AACTGGAGCG CAACGAGGCG GGCCGGGTGA ACAGCCCTCA GGAGGCTGCG CGCTCCGTTT CCGTGACGCG GGACCTGCTG CTCCTCGCCT GGCCTGCCAT CACGGAGAAC TTGCTCCAGA GCGCGATGGG CTTCGCGGAC AGCTTCTTCG TGTCCCGGCT GGGCCTGGAA GCCGTCGCTG CTGTGGGCGT CTCCAACGCG CTGCTTCAGG TGTTCTTCGC GGTCTTCCTT GCCGTTGCCA CCGCCTCCGG CACGTTCAGC GCCCGCGCGA CCGGCGCCAA GGATGCCGCC GCGGTCCAGC GGGCGACGGT GCAGGCGTTG TGGCTGGCCG CCCTCGTCGG GCTGATCTGT GGCCTCCTCG CCCTGGTGCT GGCGGGGCCA CTGCTCACCG TGATGGGGGC CGCGCCGGAA GTCCGCGCTG CTGGGGAAAC CTACTTCCGC ATCGTGGCCG TGCCCTCAGT GGTCATCGCC GTGATGTCTA CCGCAGGCGC GGTGTTGCGG GGGGCCGGGG ATACGCGGGC GGCCTTGAGG GCGGGCCTGT GGATGAATGC CGCCCATGTC GTGCTGGACC CGCTCCTGAT CTTTGGCCTG GGGTTTAGCG GCCTGGGCCT CGTGGGCGCG GGCGTGGCGA CGGTCCTCGC GCGGTTGCTG GGGGCAGGAC TGCTGCTGGC ACGGCTCCGA CGGGCCGGGA CGCTGCCGTC CTCGTGGCGT GGGGCCGGGC CGGACTGGGG CCTCATGCGC CGCATGTCGC GTCTGAGTGT TCCAACTGCC CTGGAACGGT TGGCGATGCG CTTCGGGCAG ATCGTGTATT TCGGGCTGAT CCTGCGGCTG GGTACCGAGG TCTACGCCGC CCATACCCTG ACCGGGAACT TCACGCTGTT CGCCTCGGTG GCGGGAACCG GCCTCGCGGC AGCCATCAGC GCGCGGGTCG GGCAGCGGCT CGGCGCGGGC GACGAGGGCG AGGCACGGCG CTATGCCCTG TCCGGCATCT GGGTGTCGTC CGTCTTGATG ACGGCCCTCG CCCTGCTCGC CTGGGTGGCG TCGTTCTGGG GCGCGAGTCT CTTCACAAGT GACGCGCGAG TCGTGGCCTT GATCGTGCTG GCCCTGGGCA TCGACGTCCT GACGCAACCG GCAACGGGAG TGGTCACAGC CTTGACAGCG ACCCTGCAAG CCGGTGGCGA TACCCGCTTT CCCATGTGGA CCACGCTGGT CGGCATCTGG GGCGTGAGGA CGGTCGGCGT GTATTTGCTG GGAGTCCGCT GGGGACTTGG CCTCGCCGGG GTCTGGCTGG CCATTCTGCT GGACAACTCC CTTCGGGCAT TCGCGCTCTG GCTCCGTTAC CGCTCGGGGC GCTGGATTCA GGGTCTCTGA
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Protein sequence | MRNELERNEA GRVNSPQEAA RSVSVTRDLL LLAWPAITEN LLQSAMGFAD SFFVSRLGLE AVAAVGVSNA LLQVFFAVFL AVATASGTFS ARATGAKDAA AVQRATVQAL WLAALVGLIC GLLALVLAGP LLTVMGAAPE VRAAGETYFR IVAVPSVVIA VMSTAGAVLR GAGDTRAALR AGLWMNAAHV VLDPLLIFGL GFSGLGLVGA GVATVLARLL GAGLLLARLR RAGTLPSSWR GAGPDWGLMR RMSRLSVPTA LERLAMRFGQ IVYFGLILRL GTEVYAAHTL TGNFTLFASV AGTGLAAAIS ARVGQRLGAG DEGEARRYAL SGIWVSSVLM TALALLAWVA SFWGASLFTS DARVVALIVL ALGIDVLTQP ATGVVTALTA TLQAGGDTRF PMWTTLVGIW GVRTVGVYLL GVRWGLGLAG VWLAILLDNS LRAFALWLRY RSGRWIQGL
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