Gene Dgeo_2540 details

Gene Information

• Locus tag: Dgeo_2540
• ID: 4073771
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Deinococcus geothermalis DSM 11300
• Kingdom: Bacteria
• Replicon accession: NC_008010
• Strand: +
• Start bp: 507804
• End bp: 508382
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 641228935
• Product: ABC transporter-related protein
• Protein accession: YP_594048
• Protein GI: 94972008
• COG category: [R] General function prediction only
• COG ID: [COG4619] ABC-type uncharacterized transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.263174
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGGCTG GCGAGAGCGT CGCGGTGGTT GGGCCTTCAG GGTCGGGCAA GAGCGTTCTG 
CTGCGAACGC TGGCGGGGCT GGAGGTGGTG GAGGCGGGCG AGGTGCGGTT TCAGGGAAAG 
CCGCAGGGCG CGTGGCCTAT GTCCGAATAC CGGGCGCACG TCCTGTACCT GCCGCAGCGT 
CCGGCTTTCG ACGAGGGCCG CGTCCTCGAC GTGTTGCGTG CGCCCTTCGG GTTCCGGGTT 
CATCAGCAGC GGCGCTTTGA GCAAGCAGCG GCAGGACGGC TGCTCGCTTC CCTTGGGCGG 
GACGAGGCGT TGCTCTCACG GGACGCCGCC ACCTTGTCCG GTGGGGAGGG CCAGATCACG 
GCGCTGGTGC GCGCCCTGCT GTTGGGACCA TCGGTGCTGC TCCTCGACGA GGCCACGTCC 
GCCCTGGACC CCGAAACGGT TGCCCTGGCT GAAACGCTGC TTGGCCACTG GTGTGTCGAA 
ACACCGGGAC GCGCCCTGAT CTGGGTCAGC CACGACCCGG CCCAGCGGCG ACGGGTGGCC 
CAGCGTGAGC TGCCCCTGGT TCCGGCGGTG GTAGCGTGA 

 

Protein sequence

MTAGESVAVV GPSGSGKSVL LRTLAGLEVV EAGEVRFQGK PQGAWPMSEY RAHVLYLPQR 
PAFDEGRVLD VLRAPFGFRV HQQRRFEQAA AGRLLASLGR DEALLSRDAA TLSGGEGQIT 
ALVRALLLGP SVLLLDEATS ALDPETVALA ETLLGHWCVE TPGRALIWVS HDPAQRRRVA 
QRELPLVPAV VA