Gene Dgeo_2539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2539 
Symbol 
ID4073770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008010 
Strand
Start bp508379 
End bp509179 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content68% 
IMG OID641228936 
Producthypothetical protein 
Protein accessionYP_594047 
Protein GI94972007 
COG category[R] General function prediction only 
COG ID[COG0390] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID[TIGR00245] conserved hypothetical protein TIGR00245 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0939059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGTGC CCCTGAGTTT GTGGCAGGTG GCGCTCGCCG CGGCCCTCCT GCTGGTGAAC 
GTCGCTCTAT CGTGGCGGCT GCGGCTCGGT CTTGGACGGG ACATCGTGGT GGCAGGCGTG
CGGATGGTGG CGCAGTTGCT GCTGGTCGGG CTGATCCTGG GGTGGGTGTT CGCCCTCCAG
CACCCGCTGC CGGTGGTGGG CATCGGTCTG GTCATGACCC TGCTGGCCGG GCAGGCCGGG
GTGGGGCGGG TCCGGCGGCG CTACGCCCGA ATCTACCTCG ACAGCTTCAT CGCGGTGTTC
GGAAGTTCGT TTGTCCTGAC GGGCCTGACG CTGGCGGGCA TCCTGCGGAT TCATCCCTGG
TTCGAGCCGC AGTACGCGAT TCCCATTCTC GGGATGGTGC TGGGCAATAC CCTCACGGGC
GTATCGCTGG CCCTCGACCG CTTCACGTCG GACGTCTTCG GGCGGCGCGG TCAGATCGAG
GGGCGGCTGG CACTGGGGGC GACGCGCTGG GAGGCGGCCC ACACTGAGGT GGCTTCGGCA
GTGCGGACGG GGATGCTGCC GACGCTGAAC AGCATGGCGG TGATGGGCGT CGTAAGCCTG
CCGGGCATGA TGACGGGGCA GATTCTCGCG GGCGCTTCCC CAGGGACGGC GGTGCGTTAC
CAGATCGTGA TCATGTTCGT TCTCGCGGCC AGTTCTGCAC TGGGGGCCTT GACCGTGGTC
TGGCTGGCCT TCCGGGCACT GTTCGACTCC CGTGACCGCC TGCGGGCCGA ACGGCTCAGC
GGGCCACAAG GGAACGGATG A
 
Protein sequence
MSVPLSLWQV ALAAALLLVN VALSWRLRLG LGRDIVVAGV RMVAQLLLVG LILGWVFALQ 
HPLPVVGIGL VMTLLAGQAG VGRVRRRYAR IYLDSFIAVF GSSFVLTGLT LAGILRIHPW
FEPQYAIPIL GMVLGNTLTG VSLALDRFTS DVFGRRGQIE GRLALGATRW EAAHTEVASA
VRTGMLPTLN SMAVMGVVSL PGMMTGQILA GASPGTAVRY QIVIMFVLAA SSALGALTVV
WLAFRALFDS RDRLRAERLS GPQGNG