Gene Dgeo_2411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2411 
Symbol 
ID4073639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008010 
Strand
Start bp75909 
End bp77054 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content65% 
IMG OID641228542 
Productextracellular ligand-binding receptor 
Protein accessionYP_593919 
Protein GI94971879 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGGC CCGTCCGCCT GCTCCTGACC GCTCTGCTCG CCGCCTCGTC CCTTGCGCTC 
GCAGAGGTAC GGGTGGGCGT GATCGTCTCC TCGACCGGGC CGGCGGCCAG CCTGGGCATC
CCCGAGAAAA ACACGGTTTC GCTGCTGCCG CAAACCATCG GCGGCCAGAA GATCGTCTAC
ACTGTCCTCG ACGACGCCTC CGACACGACC GCTGCCGTCA CCGCCGCGCG CAAGCTGATT
CAGGACAACA AGGTAGACCT GATCATCGGC ACGACGACCA CGCCTGCGTC TCTGGCGATG
ATTGACGTGG TGTCGGAGGC GAAGGTACCC ATGATCAGCC TGGCGGCCTC CGAGGCGATC
ATCAAGCCGG TAGACGACAA ACGCCGCTGG GTGTTTAAGA CCCCGCAGAC CGACGCGATC
ATGGCCGCCG CCATCGCGCA GCACATGCAG CAAAACGGCG TGAAAACCGT CGGCTACATC
GGTTTCAACG ACGCCTACGG CGAGGGCTGG CTGAACGAGC TTCAGAAAAA CGCGGCGGCC
CGCGGCATCA AGGTGGTCGC GACCGAACGC TACGGGCGCA GCGATACCAG CGTGACCGGC
CAGATCCTCA AGATCCTGGC CGCCAAACCC GACGCGGTGC TGATCGGGGC ATCTGGTGTG
CCTGCCGTCC TGCCGCAAAA GACCCTCAAG GACCGCGGTT TTGCGGGCAA GATCTACCAG
ACGCACGGGG TCGCCAACGC CGACTTCCTG CGGGTGGGCG GCAAGGATGT GGAAGGCGCG
ATCCTGCCCG CTGGGCCGGT GCTGGTGGCC GACCAGCTTC CCGCCACCAA CCCGCTGAAG
AAGGTGGGCC TGGATTACAC CAGCCGCTAC GAGGCCAAGT ACGGCCAGAA CTCCGTCAGC
ACTTTTGGTG CGCACCTGTG GGATGCGGGC CTGATTCTGC AAAAGGCGAT CCCGGTCGCC
CTGAAAAAGA CCAAACCCGG TACGCCTGAG TTCCGCGCGG CCCTGCGGGA CGCCCTGGAG
AACACCAAGA ACGTGATCGG CGCCCACGGC ATCTTCAATT TCGGTCCCCA GGATCACCTG
GGTCTGGACG CCCGGAGCCG CGTGATGGTG CAGGTCGCGG ACGGCACCTG GAAACTGATC
AAGTAA
 
Protein sequence
MMRPVRLLLT ALLAASSLAL AEVRVGVIVS STGPAASLGI PEKNTVSLLP QTIGGQKIVY 
TVLDDASDTT AAVTAARKLI QDNKVDLIIG TTTTPASLAM IDVVSEAKVP MISLAASEAI
IKPVDDKRRW VFKTPQTDAI MAAAIAQHMQ QNGVKTVGYI GFNDAYGEGW LNELQKNAAA
RGIKVVATER YGRSDTSVTG QILKILAAKP DAVLIGASGV PAVLPQKTLK DRGFAGKIYQ
THGVANADFL RVGGKDVEGA ILPAGPVLVA DQLPATNPLK KVGLDYTSRY EAKYGQNSVS
TFGAHLWDAG LILQKAIPVA LKKTKPGTPE FRAALRDALE NTKNVIGAHG IFNFGPQDHL
GLDARSRVMV QVADGTWKLI K