| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2371 |
|---|
| Symbol | |
|---|
| ID | 4073599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008010 |
|---|
| Strand | + |
|---|
| Start bp | 117780 |
|---|
| End bp | 119000 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641228581 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_593880 |
|---|
| Protein GI | 94971840 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.363547 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTTCTT TGGCGACCTA TGGCGTCGGT TACGTGGCCC GGCCGATTGG GGCCTTTATG
CTGGGGCGTT ACGGCGATCG CCACGGGCGC AAGAGCGTGT TGGTGTTGTG CATGCTGTTG
ATGGGCTTCT CGACCCTGGC GGTCGCCTTC TTGCCCACCT ACCAGCAGGT TGGGGTCGTG
GCCCCGTTGC TGTTGGTGAT CTTGCGACTT ATCCAGGGCT TTGCGGTTGC TGGTGAAATC
AGCGGCGCCA GCTCAATGAT CTCCGAACAC GCGCCTTTTG GTCGTCGGGG TTACTTTTCC
AGTTTTGCAC TCCAAGGAAC ACAGATCGGA CAACTGCTCG CCGCCGCCGT GTTTTTGCCG
CTGGCCCACT TTCTGCCTGA GGAGGACTTC AACTCCTGGG GTTGGCGTAT TCCGTTTCTC
CTGAGTCTAT TGGTGCTGAT CGCGGGATAC TTCATTCGCC GCAACGTGGA TGAGACGCCC
GCCTTTACTC GGGAAGAAGA GACGGGCAGT GTACCCGAGT CACCCATTCG CACGGCCTTC
CGCTTGGGCG GGGCCGACAT CTTCCGGGTG ATGTGTATGG CCCTGATGAA CGTTATTCCC
ACCATCACCA CTGTGTTTGG GGCTGCCTAC GCCACGCAAA AGGACTACGG GATCGGGTTT
TCCAAAGAGG TCTACTTATG GATTCCGGTG GTGGGAAATA TCGTCGCCGC CCTGCTTATT
CCCTGGGTTG GCTCGCTCAG TGACCGCATT GGCCGCCGCC CGCCGATCAT CTTCGGGGCC
TTGGGCTCGG GATTGCTGTC CTTTGGATAT CTGTGGGCCA TAGGACAACA CAACGTCACG
CTGGCCTTTG TCTTTTCGAT CCTGATGTGG GGCATCGTCT ATCAGGGATA TAACGCCACG
TTCCCCTCCT TTTATCCCGA ACTGTTCCCT ACCAAAACCC GCGTAACCTC GATGGCGATC
GGCCAGAACA TCGGCACCAT GCTGACCGCC TTCTTTCCCG TGCTGCTTTC GCAGTACATC
GCGCCTCCGG GCAGCGCTGA TATTCCCATC AAGGTGGGTC TCTTTACCCT CATGGTAACC
ATGATCTCAG CGGCGGCGGC CTACTCCGCC CGTGAAACTT ACCGGATCCC CCTGAGCGAA
CTCGGCAACG CCAACGCCCA GCCTCTTCCC GCGGCTGAAT ACCTGCGACT GCGGGAAGGG
ACAGGAGGTA GGGCCCCCTG A
|
|---|
| Protein sequence | MASLATYGVG YVARPIGAFM LGRYGDRHGR KSVLVLCMLL MGFSTLAVAF LPTYQQVGVV
APLLLVILRL IQGFAVAGEI SGASSMISEH APFGRRGYFS SFALQGTQIG QLLAAAVFLP
LAHFLPEEDF NSWGWRIPFL LSLLVLIAGY FIRRNVDETP AFTREEETGS VPESPIRTAF
RLGGADIFRV MCMALMNVIP TITTVFGAAY ATQKDYGIGF SKEVYLWIPV VGNIVAALLI
PWVGSLSDRI GRRPPIIFGA LGSGLLSFGY LWAIGQHNVT LAFVFSILMW GIVYQGYNAT
FPSFYPELFP TKTRVTSMAI GQNIGTMLTA FFPVLLSQYI APPGSADIPI KVGLFTLMVT
MISAAAAYSA RETYRIPLSE LGNANAQPLP AAEYLRLREG TGGRAP
|
|---|
| |