| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4760 |
|---|
| Symbol | |
|---|
| ID | 4070698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 5624297 |
|---|
| End bp | 5625679 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637986804 |
|---|
| Product | microcin-processing peptidase 1 |
|---|
| Protein accession | YP_593833 |
|---|
| Protein GI | 94971785 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.447651 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0115347 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTA CGACCCCGGT CCAAAGCGTC TCGACGGTAG ACCTGCGCGA ACTCTCCGCG
GACGTAGTAC GCAAGGCGAT GAAGGGCGGC GCGACCGCCG CCGAAGTCGT GCTGCGCGAC
GGGTCGGAGT TCTCGACAAC CGTGCGTCTC GGCGAAGTGG AGACGCTGAA GGAATCGGGC
TCGCGTTCGA TGGGCGTGCG CGTGTTCTTC GGTAAGCGCT CGGCGAGCAC CTGGTCGAGC
GACTTCTCGC CGCAGGGCAT CGACAACATG GTGCGCGGTG CGCTCGATTT GGCGAAGATC
ACTTCGGAAG ACCCGTTCTC GGGGATCCCG GAACCCGAGC AACTTGGGCA GATCACAACC
AACCTCGATC TGTATTACGA GGATGTTTAC TCGCTTTCGA CGGCCGATCG CATTGATTAC
GCGAAGCGCG CGGAGCGGGC CGCAATGGAA GCCGATCCGC GGATCCAGAA CTCCGATGGA
GCCAGCTTCG ACGCAGCGAA TGGCGTGAAG GTACTCGCGA ATTCGAATGG CTTCATCGGC
GATTACAGCC GCTCGTACTG CTCGGTGTCG GCGGTGCCGA TTGCGCAGCA GGAAGGCTCA
GCGATGCAGC GCGACTACTG GTTCTCGGTT GCGCGGACGC TGAGCATGCT CGAATCGCCG
GAAGACGTGG GCCGCGAAGC GGCGCGCCGT GCGCTGCGAA GGTTGGGCGC GAAGAAGGTG
AAGACGGCGC GGGTTCCGAT CGTGTTCGAT CCGCTGGTGG CTGGGTCACT GCTCGGGCAT
ATCTTCGAAG CGGTGAATGG CGACAGCGTG TATCGTGGCG CGTCGTACCT GGCGGGCAAG
CTCAACGAGA AAATTGCCGG CGCCAATGTG ACGATCGTCG ACGATGGAAC GATGGTCGGC
GGTTTCGGGT CGAGTCCCTT TGATGCCGAG GGTGTGCCGA CGCGACGCAC AGTGGTGATT
GAGAAGGGCA TTTTGAATTC TTACCTGCTC AATACCTACA CTGCGAAGAA GTTGAAGCTA
CAGACGACGG GTAATGCCGC GCGCGGATTG GCGGGCACCC CGGGAATCGG CGCCGGGAAC
TTCTTTATGG AGCCTGGCAC GCGCACGCCG CAGCAGATTT TTGCCGATGT GAAAGACGGT
TTCTACGTCA CGGAATTCCT TGGCTCCGGC GTGAACCTGG TGACCGGCGA TTTTTCGCGG
GGCGCCAGCG GCGTGTGGAT CCAGAACGGG GAACTCACGT TCCCGGTGGA AGAGGTCACG
GTTGCCGGGA ATCTGCGCGA CATGCTGCAC AGCGTGGTGG AGATCGGCAA CGATCTCGAA
TTCCGTGGGT CGGTGGCCTG TCCGACTATG CGGATTGATG GGATGACGGT GGGCGGCGAG
TAG
|
|---|
| Protein sequence | MSTTTPVQSV STVDLRELSA DVVRKAMKGG ATAAEVVLRD GSEFSTTVRL GEVETLKESG
SRSMGVRVFF GKRSASTWSS DFSPQGIDNM VRGALDLAKI TSEDPFSGIP EPEQLGQITT
NLDLYYEDVY SLSTADRIDY AKRAERAAME ADPRIQNSDG ASFDAANGVK VLANSNGFIG
DYSRSYCSVS AVPIAQQEGS AMQRDYWFSV ARTLSMLESP EDVGREAARR ALRRLGAKKV
KTARVPIVFD PLVAGSLLGH IFEAVNGDSV YRGASYLAGK LNEKIAGANV TIVDDGTMVG
GFGSSPFDAE GVPTRRTVVI EKGILNSYLL NTYTAKKLKL QTTGNAARGL AGTPGIGAGN
FFMEPGTRTP QQIFADVKDG FYVTEFLGSG VNLVTGDFSR GASGVWIQNG ELTFPVEEVT
VAGNLRDMLH SVVEIGNDLE FRGSVACPTM RIDGMTVGGE
|
|---|
| |