Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4733 |
Symbol | |
ID | 4070671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 5595917 |
End bp | 5596705 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637986777 |
Product | ABC transporter, ATPase subunit |
Protein accession | YP_593806 |
Protein GI | 94971758 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.497706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTGG TCGAGGTGCG TCACCTCACT AAGGTCTTCG CGGGGGAGAC TCTGCTTGGG GGCCGAATCA GCGAAGTGTG CGCCGTTGAC GACGTTTCTC TCACCATTGA GCGCGGCGAA ACGCTTGGCC TCGTTGGCGA ATCCGGGTCT GGCAAGAGCA CATTAGGCCG ACTCATTCTC CGACTGATCG AGCCTACCTT GGGCGAGATA TTCTTCGAAG GCCGCGACCT CCTTCGCGCG AACCACTCCG AACTGCGGCA TCTCCGGCGC GACATGCAGA TCATCTTCCA GGATCCTTTC GGATCCCTTA ATCCGCGAAT GCGCGTCGCG GACGTGCTTG CTGAGCCGTA TTTGGTCCAC GAGAAAATGA CCGCCGAAAC CGTTCGCGCG AAGACCTCAG AACTGTTGAA GGCGGTTGGC CTCGACGCCT CGGCTCTGAC TCGCTATCCG CACGAGTTCA GCGGAGGCCA ACGCCAGCGT ATCGGGATCG CCCGGGCCCT GGCGCTGCGC CCGAAACTAA TCGTTGCCGA CGAGCCCGTC TCTGCACTCG ATGTCAGTGT GGGTGCTCAG ATTGTGAACC TGCTACAGCG GCTCCAGCGA GAGTTCTCAC TGACCTATCT GTTCATCTCC CATTCCATGC CGGTGGTTCG CTATCTTTCG ACGCGGATTG CGGTTATGCG GTTTGGGAAA TTGCTGGAAG TCGGCTCGGC TGAACAAATT ACAGAGCGTC CGCAGGACTC CTACACGCAG TCGTTGCTGG CCGCCACCCC GGAAATCACG CTCTCATAA
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Protein sequence | MALVEVRHLT KVFAGETLLG GRISEVCAVD DVSLTIERGE TLGLVGESGS GKSTLGRLIL RLIEPTLGEI FFEGRDLLRA NHSELRHLRR DMQIIFQDPF GSLNPRMRVA DVLAEPYLVH EKMTAETVRA KTSELLKAVG LDASALTRYP HEFSGGQRQR IGIARALALR PKLIVADEPV SALDVSVGAQ IVNLLQRLQR EFSLTYLFIS HSMPVVRYLS TRIAVMRFGK LLEVGSAEQI TERPQDSYTQ SLLAATPEIT LS
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