Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4718 |
Symbol | |
ID | 4070656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 5581086 |
End bp | 5582417 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637986762 |
Product | three-deoxy-D-manno-octulosonic-acid transferase-like |
Protein accession | YP_593791 |
Protein GI | 94971743 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.647141 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACACTGC GGCTTAGGGT TAGTGGTAAG TACAATGGCT GCGTGTACTT CGTCTACAGC CTGCTGCTGG GTCTGCTGAT GCTGTTGGCC ACTCCGTGGT GGCTGCTGCA AATGGCCCGG CATGCGAAGT ACCGCGCCGG ACTGGCGCAA CGATTCGGCG CCGTACCTGC TCAACTCAAG AACATTCACC AGCGCGTGAT CTGGGTGCAT GCGGTGAGCG TGGGAGAAGT GCTCGCCGTG AGCACGCTGG TGCGCCAACT GCGCGAACGC CATCTGAACC ATCGGGTACT CATCTCCACG ACAACAGCGA CCGGCAATCA ATTGGCCCGG GATCGCTTCG GCTTCGACAA CGTCTTCTAC TTCCCTCTGG ATTTTGGATT CGCGATTCGT CCTTACCTGA AGGCGCTGCG TCCGGAGATG GTGGTCGTGG CAGAGACGGA GTTCTGGCCG AACTTCCTGC GGTTGTCGGG AAATGCCGGC GCAAAGATTG CCGTGGTAAA TGCGCGGATT TCCGATCGCT CGTTTCCGCG ATACCGGAGA TGGAAGAGCG TCTTCGCACG CGTGCTGCGG CCGGTGGGCG TGTTCCTGGC ACAGAGCGAA GAGGACGCGC GCAGGATCAT CGAGATCGGT GCCTCGAAGG ACTGCGTACA TGTGGGCGGC AACCTGAAGT TCGAGGTGAA TGCCACGGCG AATGCAGAAA TTGTGCATCG TGTGCGTGAA GGCTTCGCGG ACGGCGGATC ACAGCCGCTG ATCATCGCAG GCAGTACGGT GGAAGGCGAA GAGCCCATGC TGCTGCATGC TTTCGCCGAG GTGCTGAAGG AATATCCGCG GATGGCGGTG ATCTTGGCAC CACGGCATCG GGAGCGTTTT GCGGCGGTGG CTAAGCTGGT GGCGGACTCG CCGTTTGAGC TAGTGCGGCG TTCAGATTGG GCCGATGAGC CGCTGCCGCC GGGAACGGTG CTGCTGCTCG ACAGCATCGG CGAACTCGCT TCTCTGTATG CGCTGGCAGA TGTCGCATTC GTTGGCGGAA GCCTAGTACG CAAGGGCGGA CACAACATTC TGGAGCCGGC GCAACACGGC GTGCCGATCG TGATCGGGCC GCATTACGAG AATTTTCGCG ACATCATTGC GATTTTCCAA CGCGCCGACG CGGTGCGAAT CGTGGAAGCG CCGCAACTTG GCAGTGAGTT TATTCGGTTG CTCAAAGATC ATGCGGAGCG ATCGGGGCCG TCGTCGTTGG GCCAGCGAGC GGCACAGGTG ATGCGGGCGC AGGCGGGCGC AACCGAGCGG ACGATGCAGG CACTGGAAAA TTTTCTGGCG GGTGGGCGAT GA
|
Protein sequence | MTLRLRVSGK YNGCVYFVYS LLLGLLMLLA TPWWLLQMAR HAKYRAGLAQ RFGAVPAQLK NIHQRVIWVH AVSVGEVLAV STLVRQLRER HLNHRVLIST TTATGNQLAR DRFGFDNVFY FPLDFGFAIR PYLKALRPEM VVVAETEFWP NFLRLSGNAG AKIAVVNARI SDRSFPRYRR WKSVFARVLR PVGVFLAQSE EDARRIIEIG ASKDCVHVGG NLKFEVNATA NAEIVHRVRE GFADGGSQPL IIAGSTVEGE EPMLLHAFAE VLKEYPRMAV ILAPRHRERF AAVAKLVADS PFELVRRSDW ADEPLPPGTV LLLDSIGELA SLYALADVAF VGGSLVRKGG HNILEPAQHG VPIVIGPHYE NFRDIIAIFQ RADAVRIVEA PQLGSEFIRL LKDHAERSGP SSLGQRAAQV MRAQAGATER TMQALENFLA GGR
|
| |