| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4712 |
|---|
| Symbol | |
|---|
| ID | 4070651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 5575388 |
|---|
| End bp | 5576011 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637986757 |
|---|
| Product | DNA-3-methyladenine glycosylase |
|---|
| Protein accession | YP_593786 |
|---|
| Protein GI | 94971738 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2094] 3-methyladenine DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00567] DNA-3-methyladenine glycosylase (3mg) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGGT CCTCGCTGGC GCAACTGGCG CCGTTGCCGC GCGCGTTCTT CAATCGCGAT
CCACGTATCG TTGGACGCGA ATTGTTGGGA AAAGTCTTAC TGCGCCGCGA GGGCCGGGCC
ATCCTGGCGG GCCGCATCGT GGAATGCGAA GCCTACCTTG GCGCCGACGA CGCGGCTGCC
CACTCCGCTG CGGGCAAAAC AGCGCGCAAC GCGGTGCTCT TCGGGCCTCC CGGATACGCC
TACGTGTACT TCATCTACGG CAACCACTTT TGCCTGAACG TCTCGTGCCT GCCGGACGGC
CAAGCGGGCG GGATACTCTT CCGGGCGCTG GAGCCAATCG CCGGCGTTGA GCGCATGGCA
GCTAATCGCC AGCTGGAGCC CTCGCAGCTG CGGCTGATCG CCAGCGGCCC TGGACGGCTT
GCCGAAGCCC TGGCCGTCAC CCGCGACCGT GATAACGGCA AAGACATGGT CTCGCCAAAG
AGCGACCTGC GGATCGTGGA TGACGGTTTC GGGGCGGTCG AGGTGCGCGA GACCCCGCGG
ATCGGCATCA CGAAATCGGC AGATTTGCCG CTGCGGTACA TCGTTGCGGG GAGTCCGTTC
GTCTCGGGAA AACGTTACTT ATAA
|
|---|
| Protein sequence | MPRSSLAQLA PLPRAFFNRD PRIVGRELLG KVLLRREGRA ILAGRIVECE AYLGADDAAA
HSAAGKTARN AVLFGPPGYA YVYFIYGNHF CLNVSCLPDG QAGGILFRAL EPIAGVERMA
ANRQLEPSQL RLIASGPGRL AEALAVTRDR DNGKDMVSPK SDLRIVDDGF GAVEVRETPR
IGITKSADLP LRYIVAGSPF VSGKRYL
|
|---|
| |