| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4688 |
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| Symbol | |
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| ID | 4070738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 5548574 |
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| End bp | 5549095 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637986733 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_593762 |
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| Protein GI | 94971714 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.204585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.116393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAGCC ACGAGCGCGT GCGCGAATTC GACCGAGTGG TGACGCCGCA TCTCGCGCGC
GCCTACAACC TCGCTCACCT GATCGTTGGC AACAGTGCTG ATGCCGAGGA CCTCGTGCAG
GAAGCATCGC TGCGCGCCTT CCGCGGGCTC GACGGTTATC ACGGCGGAGA CGCCCGCACT
TGGCTGCTGG TGATCGTGCG CAACGTCTGC TACTCGTTTC TCTCGCGCAC GCGCAACGTG
CAGGAGGTCG TCGAGTTCGA GGAGGAGCAG CACTCGGGTG AGAGCGCAAC GCCGGAAGCG
TCGGTACTTC AGACCGCGGA TGCTGCGGAC GTCCGCCGCG CCATCGAGGA GTTGCCGACA
GAGTTCCGCG AGGCGCTGGT ACTACGCGAA ATGGAAGAGC TTTCGTACAA GCAGATCGCG
GAGATCACGG GCGCGCCGGT TGGCACCGTA ATGTCGCGCC TGTCGCGAGC GCGCCAGCAG
TTGCGGCAGC GACTGCAGAA GCAGGCGGGA AAGGGAGCAT GA
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| Protein sequence | MESHERVREF DRVVTPHLAR AYNLAHLIVG NSADAEDLVQ EASLRAFRGL DGYHGGDART
WLLVIVRNVC YSFLSRTRNV QEVVEFEEEQ HSGESATPEA SVLQTADAAD VRRAIEELPT
EFREALVLRE MEELSYKQIA EITGAPVGTV MSRLSRARQQ LRQRLQKQAG KGA
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