Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4687 |
Symbol | |
ID | 4070737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 5547783 |
End bp | 5548577 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637986732 |
Product | putative anti-sigma factor |
Protein accession | YP_593761 |
Protein GI | 94971713 |
COG category | [K] Transcription |
COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.139907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0591052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATGC AATGTGAAGA TGCGCGGCCG CTGATCGAAC TCTATGCCGA CCGCGAACTC GACGTCTCGC GCGCGGTGGA GGTCGAGCGC CATCTCGAAA CGTGCAGCGC GTGTGCCGAG CAACTGAAGC AGGCGAAGTC CCTCGCGAGT GTCGTGCGAA GCAGCGGCGT TTACGGCACG ATGCCTGCGA GTCTTAACGC GCGCGTGCAC AGCGCAATCC TCGAAGAAGC CGGAGTGCGC GAACAGCCAC GCCTCATCAC TCCACCGAAG CGAGAGCGCG TCGCCTGGTG GAGACCGCTA GGCATCGCGG TTGCCGCTGT CCTGATCCTC GCGGTCTTCG CGTGGCACTG GCTACCAACG CGCCCGGCAA ACTCCGAGCA GAACACGCTG CTCGCGCAGG AAATGCTCGA CAGCCACGTT CGCTCGCTCA TGGCCGATCA CCTCTACGAT GTGCCCTCCA CCGACCAGCA CACGGTGAAG CCATGGTTTG ATGGCAAGCT CGACTTCGCG CCGCCGGTCG TCGATCTCAC CAGTGATGGC TTCGAACTCG CCGGCGGACG CCTCGACTAC ATCGATGGCC GCCCCGTGGC AACCGTCGTT TATCGCCGCC GCAAGCACGT CATCAATCTC TCGATGTGGC CCGAGAGCAC GACCGCTCCC CTCAGCGCAA CCATGCGCAA CGGCTACAGC CTCCTCCACT GGAAGAACGG CTCACTGGAG TTTTGGGCGG TGAGCGATCT CAATCCGCAG GAACTGCGAG AGTTTGTCGG GTTGATCCAG GCGAAGGCGC GCTGA
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Protein sequence | MSMQCEDARP LIELYADREL DVSRAVEVER HLETCSACAE QLKQAKSLAS VVRSSGVYGT MPASLNARVH SAILEEAGVR EQPRLITPPK RERVAWWRPL GIAVAAVLIL AVFAWHWLPT RPANSEQNTL LAQEMLDSHV RSLMADHLYD VPSTDQHTVK PWFDGKLDFA PPVVDLTSDG FELAGGRLDY IDGRPVATVV YRRRKHVINL SMWPESTTAP LSATMRNGYS LLHWKNGSLE FWAVSDLNPQ ELREFVGLIQ AKAR
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