| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4679 |
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| Symbol | rplA |
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| ID | 4070724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 5541221 |
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| End bp | 5541928 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637986719 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_593753 |
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| Protein GI | 94971705 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000682303 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0030741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCAAAGC CAGGTAAGAA AATCGAAGCG GCGCGCAAGC AAGTCGAAGT GCGTCCGTAC
GCTTTGCAGG ACGCAGTTCC TCTCCTGCAG AAGGTGAAGT TCGCCAAGTT CGACGAGACC
GTCGACTTGA CGCTTCGTTT GGGTGTCGAC CCGAAGCATG CTGACCAGAT GGTCCGCGGC
ACGGTCGTCC TGCCCCACGG TCTGGGCAAG ACCAAGATTG TGTTGGTCAT CGCCAGCGGT
GAAAAGCAGC GCGAAGCCGA AGCGGCCGGT GCTGATTTCG TCGGCGGCGA GGACATGGTC
GAGAAGATCG CGAAAGAGGG CTGGACCGAT TACGACGCGG TGATCTCGAC GCCCGACATG
ATGCGTTCCG TCGGTAAGTT GGGTAAAGTG CTCGGTCCCC GCGGCCTGAT GCCGAACCCG
AAGACTGGCA CCGTCACCAC TGACGTTGCC TCGGCCGTCC GCGAAGTGAA GGCCGGTAAG
GTTGAGTTCC GCACCGACAA GACCGGATTG GTCCACGTTC CGGTTGGAAA GATTTCGTTT
CCGCCTGACA AGCTGGTGGA CAACGCCACG ACCCTGATCA CAAGCGTGGT CAAGGCCAAG
CCGTCCGCCG CCAAGGGCAA GTACATCAAG GGCTGTTACC TCAGCTCTAC GATGGGCCCT
GGGATCTCCA TTGACACGAC TGCCATTGAG GCAGCGTCGA AGAGCTAG
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| Protein sequence | MAKPGKKIEA ARKQVEVRPY ALQDAVPLLQ KVKFAKFDET VDLTLRLGVD PKHADQMVRG
TVVLPHGLGK TKIVLVIASG EKQREAEAAG ADFVGGEDMV EKIAKEGWTD YDAVISTPDM
MRSVGKLGKV LGPRGLMPNP KTGTVTTDVA SAVREVKAGK VEFRTDKTGL VHVPVGKISF
PPDKLVDNAT TLITSVVKAK PSAAKGKYIK GCYLSSTMGP GISIDTTAIE AASKS
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