| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4675 |
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| Symbol | |
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| ID | 4070720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 5530339 |
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| End bp | 5534676 |
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| Gene Length | 4338 bp |
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| Protein Length | 1445 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637986715 |
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| Product | DNA-directed RNA polymerase, subunit beta-prime |
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| Protein accession | YP_593749 |
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| Protein GI | 94971701 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0479992 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAACTTT CCCTTCTTCC AGGAAACGTT CCAGCAAGTG ATCCGGAAGA CGCCAGCAGC
GACGATGCGC TGCACGGATC CCCGCATTCG AGCCACAGGC AAGAACCCGC GGGGAAGGAG
GACAATTTGT ACCGTTCGAG CCCTTTCGAC CTCGGAAGCA ACATCACGGA TTTCGACGCA
ATCCGCATCA GCCTTGCTTC GCCGGAAAAG ATCCGGAGCT GGTCTCACGG TGAGGTAACT
AAACCCGAAA CCATCAACTA CCGCACGTTC AAGCCCGAGC GTGATGGCTT GTTCTGCGCC
CGCATCTTTG GCCCGGTCAC GGACTGGGAA TGTTTGTGCG GCAAGTACAA GCGCATGAAG
CACCGCGGCG TTATTTGCGA CAAGTGCGGC GTGGAAGTCA CGCTCAGCAA GGTCCGCCGC
GAACGGCTTG GCCACATCGA ACTGGCCTCG CCCTGCTCGC ACGTGTGGTT CTTCAAGGGA
TTGCCCAGCC GCATCGGCCA CATCCTCGAT ATCTCGCTTC GCGACCTCGA GTCGGTGTTG
TATTTCGAAG CCTATGTCGT GGTTGAGCCC GGCGACGCGC CCGTCAAAGA ACGCGAAGTC
ATCAAGGACG AAACCAAGTT CCGCGAACTC GATCAGCAGT ACCGTCCCAC TGGTTTCAAG
GCCCTCATGG GCGCCGAAGC CATTAAGGAA TTGCTGAAGC GCGTGGACGC CGAATCGCTC
TCGGTCGAAC TCCGCGAGAA GATGAAGAAC GAGACGTCCA TCCAGAAGCG GCTCAAGTTC
GCCAAGCGCC TCAAGGTTGC TGAAGCGTTC CGCAAGAGCA CCAACAAGCC GCAGTGGATG
ATTCTCGACG TGATCCCGGT CATTCCGCCG GAGTTGCGTC CTCTCGTTCC ACTCGACGGC
GGCCGTTTCG CCACCTCCGA TCTCAACGAC CTCTATCGTC GTGTGATCAA CCGTAACAAC
CGCTTGAAGA AGCTCATGGA CCTGCATGCG CCCGAAGTCA TCGTGCGCAA CGAAAAGCGT
ATGTTGCAGG AAGCCGTTGA CGCTCTCTTC GACAACGGAC GTCGTGGCCG CGTACTCCGC
GGTGCCAACA ACCGTCCGCT GAAATCGCTC TCCGACACGC TCAAAGGCAA GCAGGGCCGC
TTCCGTCAGA ACCTGCTCGG CAAGCGCGTG GACTACTCGG GACGTTCGGT CATCGTGGTT
GGTCCGGAGC TCAAACTCCA CCAGTGCGGT TTGCCGAAGA AGATGGCGCT TGAACTCTTC
AAGCCGTTCA TCTATCACCG CCTCGAGCAG ACCGGCCACT GCACCACGAT CAAGCAAGCC
AAGGAACTCG TGGAGCAGCA GGAACCGGTG GTTTGGGACA TCCTCGAAGA GGTCATCAAA
GACCACCCGG TGCTCTTGAA CCGCGCCCCA ACCCTTCACC GCCTCGGCAT CCAGGCATTC
GAGCCGGTGC TGGTGGAAGG CAAGGCGATC AAGATCCACC CGCTCGTCTG CACGGCATTC
AACGCCGACT TCGACGGCGA CCAGATGGCG GTGCACATTC CGCTCTCTCC GGAAGCTCAG
ATCGAAGCCA GCGTGCTCAT GCTCGCTTCG CACAACATCC TGTCGCCCGC GTCAGGCCAG
CCGATCACCG TTCCTACCCA GGACATGGTG CTCGGGATGT ACTACCTGAC CAAGGCGCGT
CCGGGATCGA AGGGTGAAGG CCGCGCATTC GCGAACATTG AAGAAGTGCT GCTCGCGAAG
GAAATGGGCG AAGTGGAAAC GCTGACCCCG ATCCGCCTGC GCTACACCGG CGACGTCATG
GACCTGACCA CTGCGTACGA CGATCAGGAC GTGACCCACA CCGAGCCCGT GCCGTTCCAG
CGTCAGTACA TCAACACCAC CGTTGGCCGC GCGATCCTGA ACGACAATCT TCGCCGCGCC
ACCGCGGAGA TGCCGTACAT CAACGGCTTG CTGAAGAAGA AGGGCATTGG CAACCTGGTG
AACTACGTGT ACCTGCGCTT CGGTCTCGAG ATCACGGTGC AGATGCTCGA CCAGATCAAG
TCGCTCGGCT TCCAGTACGC CACCCGTTCG GGTCTCTCGA TCGGCATCGA CGACATGGTC
ATCTCGCCGA ACAAGGCGAA GGTCGTGAAG GAAGCCGAAC AGACGGTGAA CTCCGTACAG
CAGCAGTACC TGGACGGCGC CATCACCAAC GGCGAGCGCT ACAACAAGGT TGTCGAAATC
TGGTCGGCCA TCACCGAAAA GGTCGCGGAC GAAATGTTCG GCAACATGCA GCAAATGGAC
AAGGCCGGCG AGATCAACCC GATTTACGTC ATGGCTGACT CCGGCGCTCG TGGTTCGAAA
CAGCAGATCC GTCAGCTCTC CGGCATGCGC GGCTTAATGG CCAAGCCGTC GGGCGAAATC
ATCGAGACGC CGATCACGGC GAACTTCCGT GAAGGCCTCA CGGTGTTGGA ATACTTCATC
TCGACGCACG GCGCTCGTAA GGGCCTTGCG GATACCGCGT TGAAGACCGC CGACTCCGGC
TACCTCACCC GCCGTCTCGT TGACGTGGCG CAAGACGTCA TCATCAGCGA ATACGATTGC
GGCACGGTAG ACGGTATCTA CGTCAGCTCC ATCGTCGAAT CGGGCGAGAT CATCGAGCCC
CTGCGCGACC GCGTAATTGG CCGCGTCAGC CTCGAGAAGA TCAAGGACTA CGAAGGCAAC
GTCGTGGTCG ACGTCAACCA GGAAGTCACC GAAGACCTCG CCAACGGCAT CGCAGCCGCG
GGTATCGAAC GCGTCAAGAT CCGTTCGGTG CTCACCTGCG AATCGAAGCG CGGCGTTTGC
GCCCTCTGTT ACGGACGCAA CCTCGCCTCC GGCCGCCTGG TCGAGCTCGG TGAAGCTGTC
GGCGTCATCG CCGCACAGTC CATCGGCGAA CCTGGCACCC AGCTCACGAT GCGTACCTTC
CACATCGGTG GAACCGCGTC GCGAGTCTCC GAGCAGTCGC GTTTGGATGC CAAGAACAAC
GGAACCGCTC GCTTCCACAA CCTCACCGTC GTCCGCGCCA AGGAAGGCCA CCTTGTGGTG
ATGAACCGCA ACGGAGCCAT CACGGTCATC GACGAGAAGG GCCGCGAAAA GGAACGTTAC
GCAGTCGTGT ACGGCGCAAA GCTCCGCGTC GAAGACGGCC AGCAGGTCAA ACTCGGCCAG
GTCATGGTCG AGTGGGACCC GTACACCTTC GCGATCCTCA CGGAAATCGG CGGCGCCGTC
GGGTTCAAGG ACCTGCACGA AGGCCTCACG CTCCACGAGG AAGTGGACGA AGTCACCGGT
CTCTCGCGCC ACGTGGTCAT GGATTCGCCG GATGAAAAAC GTCAGCCGGC CATCGTGATC
AAGGGCGCCA AGGGCACCAA GCGTTACCTC ATGCCGTCGC GCGCTCACCT TATGGTGCTC
GATGGTGAAG AGGTCTTCCC GGGCGATGTT CTGGCGAAGA TCCCGCGCGA AACCACCAAG
ACCAAGGACA TCACCGGCGG TCTGCCGCGT GTCGTGGAAT TGTTCGAAGC CCGCAAGCCG
CGTGAAACGG CCGTCATCAG CGAAATCGAT GGCACCGTGA AGTTCGGCGA AGTGAGCAAG
GGTCAGCGCA AGATCTATGT CGTTGCCGAC GATGGTACCG AGCGCGAATA CTCGGTTCCC
CGCGGCGTTC ACGTCAACGT GCAGGAAGGC GAACGCATCC AGGCTGGCGA ACAGCTCATG
GATGGCCCGC TCAACCCGCA CGACATTCTC GCCGTCCTCG GTGAGAAGCA GTTGCAGTCC
TACCTGGTCA ACGAAATCCA GGAAGTCTAC CGGCTGCAGG GCGTGAACAT CAGCGACAAG
CACATCGAAA CGATCGTGCG CCAGATGATG CGCTGGGTGA AGGTCGAAGA CGTGGGCGAT
ACTAACTTCC TGCTCGAACA GCAGGTGGAT AAGTTCCGCT TCCGCGCTGA GAACGAAGCT
GCCATCGCTT CAGGAGGACG CCCGGCAACC GGCCGTCCGC TGATGCTCGG CATCACCAAG
GCCTCGCTCT CTACCGACTC CTTCATCTCC GCGGCATCGT TCCAGGAGAC CACGCGTGTG
CTCACCGAAG CCAGCATCAA CGGCGCGGTC GACCACCTGC GCGGCCTCAA GGAAAACGTC
ATCGTCGGCC GCTTGATCCC GGCCGGCACT GGCATGGAGT ACTACCGCAA CGTGGCTCTC
TCGCCCGAAC TTGAAGCGCA AGCGCAACAA GTTCAGGAAG AGGTACACCA GGCGTACGAA
GAAGCCGAAC GCGCGCTCGA GTTGCTCCGC AACGAAGGCG AAGACGAAAC CGGCAACGAA
GAACTCGTCG CCGAATAA
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| Protein sequence | MELSLLPGNV PASDPEDASS DDALHGSPHS SHRQEPAGKE DNLYRSSPFD LGSNITDFDA
IRISLASPEK IRSWSHGEVT KPETINYRTF KPERDGLFCA RIFGPVTDWE CLCGKYKRMK
HRGVICDKCG VEVTLSKVRR ERLGHIELAS PCSHVWFFKG LPSRIGHILD ISLRDLESVL
YFEAYVVVEP GDAPVKEREV IKDETKFREL DQQYRPTGFK ALMGAEAIKE LLKRVDAESL
SVELREKMKN ETSIQKRLKF AKRLKVAEAF RKSTNKPQWM ILDVIPVIPP ELRPLVPLDG
GRFATSDLND LYRRVINRNN RLKKLMDLHA PEVIVRNEKR MLQEAVDALF DNGRRGRVLR
GANNRPLKSL SDTLKGKQGR FRQNLLGKRV DYSGRSVIVV GPELKLHQCG LPKKMALELF
KPFIYHRLEQ TGHCTTIKQA KELVEQQEPV VWDILEEVIK DHPVLLNRAP TLHRLGIQAF
EPVLVEGKAI KIHPLVCTAF NADFDGDQMA VHIPLSPEAQ IEASVLMLAS HNILSPASGQ
PITVPTQDMV LGMYYLTKAR PGSKGEGRAF ANIEEVLLAK EMGEVETLTP IRLRYTGDVM
DLTTAYDDQD VTHTEPVPFQ RQYINTTVGR AILNDNLRRA TAEMPYINGL LKKKGIGNLV
NYVYLRFGLE ITVQMLDQIK SLGFQYATRS GLSIGIDDMV ISPNKAKVVK EAEQTVNSVQ
QQYLDGAITN GERYNKVVEI WSAITEKVAD EMFGNMQQMD KAGEINPIYV MADSGARGSK
QQIRQLSGMR GLMAKPSGEI IETPITANFR EGLTVLEYFI STHGARKGLA DTALKTADSG
YLTRRLVDVA QDVIISEYDC GTVDGIYVSS IVESGEIIEP LRDRVIGRVS LEKIKDYEGN
VVVDVNQEVT EDLANGIAAA GIERVKIRSV LTCESKRGVC ALCYGRNLAS GRLVELGEAV
GVIAAQSIGE PGTQLTMRTF HIGGTASRVS EQSRLDAKNN GTARFHNLTV VRAKEGHLVV
MNRNGAITVI DEKGREKERY AVVYGAKLRV EDGQQVKLGQ VMVEWDPYTF AILTEIGGAV
GFKDLHEGLT LHEEVDEVTG LSRHVVMDSP DEKRQPAIVI KGAKGTKRYL MPSRAHLMVL
DGEEVFPGDV LAKIPRETTK TKDITGGLPR VVELFEARKP RETAVISEID GTVKFGEVSK
GQRKIYVVAD DGTEREYSVP RGVHVNVQEG ERIQAGEQLM DGPLNPHDIL AVLGEKQLQS
YLVNEIQEVY RLQGVNISDK HIETIVRQMM RWVKVEDVGD TNFLLEQQVD KFRFRAENEA
AIASGGRPAT GRPLMLGITK ASLSTDSFIS AASFQETTRV LTEASINGAV DHLRGLKENV
IVGRLIPAGT GMEYYRNVAL SPELEAQAQQ VQEEVHQAYE EAERALELLR NEGEDETGNE
ELVAE
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