| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4661 |
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| Symbol | |
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| ID | 4070706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 5518376 |
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| End bp | 5520205 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637986701 |
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| Product | SSU ribosomal protein S1P |
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| Protein accession | YP_593735 |
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| Protein GI | 94971687 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0143658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTTCG ACGATCCAAA CGTTACCTCG TCCACCGAAC AAAGCGAAGA ACACGGTGCT
GCAGCGTCGC AGCAGCCGGT TGCTGTGCAG GCCCATAATC CACCCGAGGC AAAGCCCACT
GCGGGCCGTC CTCGCAACGA AGAGAACATG ACGGAAGATT TCGCAACCGC ACTCGAATCC
TTTGAACAAG AACAGTCTGA GCAGGCATTG AATGAGGACC GCGTCCTCGT TGGCCGAGTG
CTCAGCATAA CCCCCCAGTA CGTCGTCGTA GACGTGGGCT TGAAGTCCGA GGGCGTAGTG
CCCATCGAGG AAGTCAAGGA CCACGACGGC AACGTTTCCT TCCAGCCGGG CGAAGAAATC
GCCGTGATGC AGGAAAAGGG ACACACCGAA GAGGGGTACG TGCACCTCTC CCACCAGAAG
GCACAGCGCC TGAAGGCATG GGACGAGATC GAGAAAGCGT ACAACGATAA ATCTTCCATC
AAGGCGCGGG CGATTGACCG CATCAAGGGT GGCCTCACCG TCGACATCAT GGGAGCGCGC
GCGTTCCTGC CAGGTTCCCA GGTGGACCTG CGGCCGGTGC GCAATCTTGA CGCACTGAAG
GGCCATGAGC TCGAAGTCCG GATCATCAAG CTGAACAAGA AGCGCGGCAA CATCGTAGTT
TCGCGCAAGC AGATCCTGGA AGAAGAGCAG AACGACAAGA AGTCGAAGAC GCTCGAGCAC
CTCAACGAAG ACGCGGTTCT CACCGGCACG GTGAAGAACC TGACCGACTA CGGTGCGTTC
GTTGACCTCG GCGGCATCGA TGGCCTGCTG CACATCACCG ACATGTCGTG GGGACGCCTG
ACTCATCCGC GCGACCTCGT TCAAGTCGGC GACCAGATCC AGGTAAAGGT GCTGAAGTTC
GACCGAGATA AGCAGCGTGT CTCGCTGGGC TTCAAGCAGC TCACGCCTGA CCCGTGGCTC
GACGCATCCG AACGGTACCC GATTGGCGCG CGCGTACACG GCCGCGTGAT CAGCGTGACC
GACTACGGTG CGTTCATCGA ACTCGAACAG GGGATTGAAG GTCTCGTGCA CGTGAGCGAG
ATGACCTGGT CGAAGCGGAT GAAGCATCCG TCGAAAATCG TCAACGTTGG CGATCAAGTC
GACGCAGTGG TGCTGAACGT GAATCCGCAG GAACGTCGCA TCAGCCTCGG CCTGAAGCAG
CTCGAAACTA ACCCGTGGGA GTCGCTGCAT GAGAAGTTCC CGGTGGGCGG CGTGGTTGAG
GGCAAGGTCC GCAACCTGAC CGACTTCGGC GCGTTCATCG AGATTGAAGA CGGCATCGAC
GGCCTCGTCC ACGTCAGCAA CCTGAGCTGG ACGAAGCGCG TGAAGCATCC TTCGGAAGTG
CTGAAGAAGG GCGATAAGGT CAAGGCTGTG GTGCTCGCAA TCGAGCCCGA CAACCGCCGC
CTCTCGCTCG GCGTGAAGCA GTTACAGCCC GATGTCTGGG AGACGTTCTT CGAAACGCAT
CGCGTTGGCG ACATCATCCA CGGCAAGGTG CTGCGCCTCG CGAGCTTCGG TGCATTCATC
GAGATCGCGG ACGGAGTGGA GGGCCTGTGC CACAACTCCG AAGCGAGCGA TGAGCACGGC
GCTCCGCTCA AGCTGGAACC CGGACAAGAG TTCGACTTCA AGATCATCAA GATGAATCCT
GATGAAAAGA AGGTCGGCCT CAGCCTCCGC GCAGTCGGCG AAGAAGCCAG CCGCGTAGAG
ATCGAGAACT ACAAGGCTCC GGCCTCGAGT TCTCCGGGCG CTGCGACCAT CGGCGAACTG
CTAAGCTGGA AGCGAGAGCA GCAAGACTAA
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| Protein sequence | MPFDDPNVTS STEQSEEHGA AASQQPVAVQ AHNPPEAKPT AGRPRNEENM TEDFATALES
FEQEQSEQAL NEDRVLVGRV LSITPQYVVV DVGLKSEGVV PIEEVKDHDG NVSFQPGEEI
AVMQEKGHTE EGYVHLSHQK AQRLKAWDEI EKAYNDKSSI KARAIDRIKG GLTVDIMGAR
AFLPGSQVDL RPVRNLDALK GHELEVRIIK LNKKRGNIVV SRKQILEEEQ NDKKSKTLEH
LNEDAVLTGT VKNLTDYGAF VDLGGIDGLL HITDMSWGRL THPRDLVQVG DQIQVKVLKF
DRDKQRVSLG FKQLTPDPWL DASERYPIGA RVHGRVISVT DYGAFIELEQ GIEGLVHVSE
MTWSKRMKHP SKIVNVGDQV DAVVLNVNPQ ERRISLGLKQ LETNPWESLH EKFPVGGVVE
GKVRNLTDFG AFIEIEDGID GLVHVSNLSW TKRVKHPSEV LKKGDKVKAV VLAIEPDNRR
LSLGVKQLQP DVWETFFETH RVGDIIHGKV LRLASFGAFI EIADGVEGLC HNSEASDEHG
APLKLEPGQE FDFKIIKMNP DEKKVGLSLR AVGEEASRVE IENYKAPASS SPGAATIGEL
LSWKREQQD
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