Gene Acid345_4660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4660 
Symbol 
ID4070817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5517400 
End bp5517882 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content59% 
IMG OID637986700 
Producthistidine triad (HIT) protein 
Protein accessionYP_593734 
Protein GI94971686 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.374952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTACC TCTGGACGCC TTGGCGCTAT GCGTACATCA CCTCGGCTGA CCGCGCTTCC 
GGCTGCATCT TCTGCGACAA GCCCCGCGAA AACGACGACC GCAAGAACTA CATCGTTCAC
CGCGGTGAGC ACTGCTACAT CATCCTCAAC GCGTTCCCTT ACACCAGTGG GCACGTGATG
GTCGTCCCTT TCGCCCACCT CGACCAGTTG GACAAGCTTC CGCGCGACGC CGCCCACGAG
ATGATCGACC TTTCGCAGCG TATGGAGTCG GTCTTGCGGA AGACTTATAA CGCCGAGGGC
GTGAATCTGG GCATGAACAT TGGTAAGTGC GCGGGAGCCG GAGTTGCAGG CCACATCCAC
ATGCACGTCC TGCCGCGATG GACTGCTGAC GCGAACTTCA TTAGCGTGGT CGGCGAGACG
CGGGTTTTAC CTGAGACGCT CGACCAGACT TATGAGAAGA TTGCGAGCAC TTTAAGGACC
TGA
 
Protein sequence
MDYLWTPWRY AYITSADRAS GCIFCDKPRE NDDRKNYIVH RGEHCYIILN AFPYTSGHVM 
VVPFAHLDQL DKLPRDAAHE MIDLSQRMES VLRKTYNAEG VNLGMNIGKC AGAGVAGHIH
MHVLPRWTAD ANFISVVGET RVLPETLDQT YEKIASTLRT