Gene Acid345_4657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4657 
Symbol 
ID4070814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5514627 
End bp5516030 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content61% 
IMG OID637986697 
Productserine phosphatase 
Protein accessionYP_593731 
Protein GI94971683 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.767582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATAGCG ACACCGAGAT CCGTGCGATT TTGAGCGTGG ACCTCGTGTA CTTCGCGATC 
GGCGTTCTCA TCCTGACCGT CGGTTTGCTC TCCATTCTGC AAGGGGTCTT CTCGCGGCCG
CGCCAGCGGA TCACCGCATT TTTCGGGCTG ATTGGAACCC TCTACGGAAG CCGTTTGCTG
CTGCAGCTTC GCATCGTCCC GTTCGTTCTC GGACTCTCCA CTTATCTCGA CCGCCAAATG
TGGTCCGCAA TGAATTACGT GATGCCGATT GCCGGCATCT ACATCTGGAC CTACTTCGCC
AGTCCGCGTT CCCACAAGTG GTTTCGAATT GCGGCTGGCT GCTTCGGCGT GTTCGCAGTC
GTCGGGATCA CGCACGATTT GTTCACCCAC TCCCCCTGGT CGTACCCAAA GATCAACGGC
GTGCTCGTCA TCGCTACGTC GTTGCTCACG GCGATCCTGC TGGTTGCCGA CATCCGCAGC
CGTTATATCC CGCTGGATGG GGCGTTGCGT TCCGCAGGCA TCGGCTTTGT CGTCTTTCAA
TTGACGGTCG TCTACGACAA CCTCGCGGCA ATCGGCGTCG TTCCGAGCGC GTGGACCGAG
CCTTTTGGCT TCCTGGTCTT CTTGTTCGCA ATGGGCTATG CGGTGCAGTA CCGGGTCTCG
CGCGACCACA ACCGGATGGT CACGATGCAG GCCGAGATGG ACCAGGCGCG TCGGATCCAG
ATGAGTATCC TGCCCGCGGG CCCGCCGGCG ACCCCACACT TTCAGATTGC CGCGAAGTAT
GAGCCGATGA CCAGCGTGGC CGGCGATCTC TATGACTTCC TGCCGCTCAG TGGCGATCGC
ATTGGGCTCT TCATCGCCGA TGTCTCTGGC CACGGACTGC CTGCGGCGCT GGTCGCGTCG
ATGCTCAAGA CGGCGCTTAG CATCGAGTCG CGCGTTACCA CCCGGCCCGC CGAGTTGCTT
GCCGAACTGA ATCGCGCCTT CTGCGGGCAA TCGCACGGGC AGTACATCAC GGCGGCCTTT
GCGGTCCTCG ATCCGCAAGC GCAATCGCTC AGCTACGCCG CTGCGGGACA TCCGCCGCTA
TTGCTGTGGA GGTCGAGTTC TGGAACGCTG GACGCGGTCG AGCAGAACGG CCTACCGCTC
GGCATCCTGC CAATCGCGGA ATATTCCGAA GTGACGGTGC CATTTGCGCG CGGCGACCGC
CTCGCGATGT ACACCGACGG CATTGTCGAA TCCGAAAATG TCGCGGAAGA AGAGTTCGGC
AGTGAGCGCC TCAGCGCGAT CCTGAAAGAT TCCAACGGTT CTGCGGGCGA ATTGCTCGGT
ACGGTGATCA CGGCTGTCGA GCGCTGGCGC GGCCAGCGCG AACAGTCCGA CGACCTGACC
CTGCTGATCG TCGAGCACGT GTGA
 
Protein sequence
MHSDTEIRAI LSVDLVYFAI GVLILTVGLL SILQGVFSRP RQRITAFFGL IGTLYGSRLL 
LQLRIVPFVL GLSTYLDRQM WSAMNYVMPI AGIYIWTYFA SPRSHKWFRI AAGCFGVFAV
VGITHDLFTH SPWSYPKING VLVIATSLLT AILLVADIRS RYIPLDGALR SAGIGFVVFQ
LTVVYDNLAA IGVVPSAWTE PFGFLVFLFA MGYAVQYRVS RDHNRMVTMQ AEMDQARRIQ
MSILPAGPPA TPHFQIAAKY EPMTSVAGDL YDFLPLSGDR IGLFIADVSG HGLPAALVAS
MLKTALSIES RVTTRPAELL AELNRAFCGQ SHGQYITAAF AVLDPQAQSL SYAAAGHPPL
LLWRSSSGTL DAVEQNGLPL GILPIAEYSE VTVPFARGDR LAMYTDGIVE SENVAEEEFG
SERLSAILKD SNGSAGELLG TVITAVERWR GQREQSDDLT LLIVEHV