| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4650 |
|---|
| Symbol | |
|---|
| ID | 4070807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 5507829 |
|---|
| End bp | 5508764 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637986690 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_593724 |
|---|
| Protein GI | 94971676 |
|---|
| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
|---|
| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.303181 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAGG TCGCGCTCTT CTACAACCCG GCTTCAGGAC GCCGCAGTGC GCAACGCGCG
CACGACGTGA AGATTGCGGC CGACGTCCTG CGCGCCGCCG GAAAACAAGT GCACGTGGAG
CCCACGCGCG GCCCTGGCAC CGCAGCTGCG CAAGTCCACG AGGCCAAGGC ACAAGGCGCA
GATACTGTCT TGATCGCAGG TGGTGACGGC ACCATCCATG ATGCCTTGCA AGGCTTGGCG
GGATCGGACC TGACCCTCGG CGTGATTCCA ATGGGTACCG GAAACGTGCT GGCTCACGAC
CTCGCGATTT CGCACCAGCC ACACGAGGCA GCCAAACAAT TGCTGGCCTT TCAGTCGCGA
CGCATTGCGC TAGGCAAGGT GACCTATCGC GGGATCCGGG GACCGGAATC GCGATGGTTC
GTTGCGGTGG CTGGCGTAGG CGGCTCCGCG AAGCTGATGT ACGACGTTCA CGCGGGTCTG
AAGGGCGCGC ACGGAATGCT CGCGTATTAT GCGCAGATGG CGCGCCTGGC GTTGCTGCAT
CGTTTCGATA GCTTCAACGT CGAATACCGC AGCGACGACG GCCAGTGGAT AAAGTGCACG
GCGGTCGAAG CCGATGCGGT GCGCATCACA AATTTTGGTG GGCTGATGCG GCGCTGGGCC
TGGGGTGCGA ACCTGCAACG TGATGACGCG CAACTGGTGC TCTTCCAAAC CGGCAGCCGT
CCTCGCTTTC TGCATTACAC CTTCAGCAGG ATCCTGGGGA GACACTGGCA CACGCCCGGA
GTGGAACTGA TCTATGCAAA AGAGATTCGG TGTACGGTAA GCAATCCGGC GCAGCGGCTA
CACGTGGAAG CGGACGGCGA ATACATTGGC GGCCCTCCAG TAACGATTGA GGTTGTGCCG
AATATGCTTA ATTTGCTGAT GGAGGCGAAA GGATAG
|
|---|
| Protein sequence | MQKVALFYNP ASGRRSAQRA HDVKIAADVL RAAGKQVHVE PTRGPGTAAA QVHEAKAQGA
DTVLIAGGDG TIHDALQGLA GSDLTLGVIP MGTGNVLAHD LAISHQPHEA AKQLLAFQSR
RIALGKVTYR GIRGPESRWF VAVAGVGGSA KLMYDVHAGL KGAHGMLAYY AQMARLALLH
RFDSFNVEYR SDDGQWIKCT AVEADAVRIT NFGGLMRRWA WGANLQRDDA QLVLFQTGSR
PRFLHYTFSR ILGRHWHTPG VELIYAKEIR CTVSNPAQRL HVEADGEYIG GPPVTIEVVP
NMLNLLMEAK G
|
|---|
| |