| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4645 |
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| Symbol | |
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| ID | 4070802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 5503522 |
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| End bp | 5504571 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637986685 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_593719 |
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| Protein GI | 94971671 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.656867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAGC AAGCACTAAT CCTATTCTTC GTCGCGCTCG TGCTGGGGAT GGTCCCGGCT
GCGATGGCGC AAACCGGTAC CGTGAAAGGC TATGTCAAAG ACAAGGGCAC GCCGATCGTG
GGCGCGCAGG TCTTGTTCGA GAATCTTGAC AACGGCCGCA AGATGACCCT GAAGACCGAC
AAGGCCGGCA ACTTCTTCAG CATCGGCGTC GCCATCGGTA GCTACAAGAT CACCATCACC
GCCGACGGCA AAACCATCTG GAACACTGCG AAGTATCCGG TCGGCGGCGG CGACGGCAAT
CCCGAGTTGA ACATCGACTT GGAGAAGGAA CGCGCCGCAC AGGCAACCGC CAATCCGGCC
AATGCGGAAG CGGTGAAGAA GGCGGAAGAG AACAAGAAAG AGAATGAGAA GATCGGCAAC
CTCAACACCA TGTTGAAGGA AGCCCAAGCC GATATGCAGG CCAAGAACTT TGACGCGGCG
ATCCAGATCA TGGAGAAGGC GACCGCGCAA GACGCAACCC ATGACATCAT CTGGGCCGTT
CTCGCCGATG CGTATCTCGG CGCGAAAAGA TACCCTGACG CGGTGAAAGC CTACGAAAAG
GCGATCGCGC TCGATCCCAG CAAAGCGCCC GTGCATAACA ACTATGCGCA GGCACTTGCC
AAGACAGGAC AGTCGGACAA GGCCATCGCC GAGTACGATG CGGCTGCCAA GCTCGATCCA
GCCCATGCCG GCTCGTTCTA CTTCAATGAA GGCGCCGTCT TGACCAATGC TGGAAAGACC
GACGACGCCA ACGCGGCCTT CGATAAAGCG ATCGCTGCCG ATCCCACCAA GGCAGACGCC
TATTACCAGA AGGGCGTGAA CCTGATGGGC AAGGCGACGC AGAAGGACGG GAAGTATGTT
GCGGCGCCGG GCACCGTCGA GGCCTTCAAC AAGTACCTCG AACTGTCCCC TGACGGACCG
AACGCTCAGA ACGCGAAAGA TATGATCGCG GCTCTTGGCG GCACAGTCGT CACCGGCTAC
AAGGCCGAAA AGGGCAAGAA GAGCAAGTAG
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| Protein sequence | MRKQALILFF VALVLGMVPA AMAQTGTVKG YVKDKGTPIV GAQVLFENLD NGRKMTLKTD
KAGNFFSIGV AIGSYKITIT ADGKTIWNTA KYPVGGGDGN PELNIDLEKE RAAQATANPA
NAEAVKKAEE NKKENEKIGN LNTMLKEAQA DMQAKNFDAA IQIMEKATAQ DATHDIIWAV
LADAYLGAKR YPDAVKAYEK AIALDPSKAP VHNNYAQALA KTGQSDKAIA EYDAAAKLDP
AHAGSFYFNE GAVLTNAGKT DDANAAFDKA IAADPTKADA YYQKGVNLMG KATQKDGKYV
AAPGTVEAFN KYLELSPDGP NAQNAKDMIA ALGGTVVTGY KAEKGKKSK
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