Gene Acid345_4631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4631 
Symbol 
ID4070788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5488978 
End bp5490237 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content60% 
IMG OID637986671 
ProductABC efflux pump, inner membrane subunit 
Protein accessionYP_593705 
Protein GI94971657 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGC TGAAGGAAGT GTTCATCGAA AGCTGGCATG CGCTGGCGCG AAACCGCACC 
CGAAGTTCGC TCACGATGCT GGGCATTGTG TGGGGCATCA CCAGTGTGAC GTTGCTGATC
GCCTACGGCA GTGGGTTCCG CAAAGTGCTG GTGGATGGGT TCGATGCATT CGGCCGCAGC
GTGGTGATTG CGTGGCCGGG ACAGACGAGC TCGCAGGCGG GCGGACAGCG CGCCGGACAA
AAGGTGCGCT TCGAAGAAGC CGACATTGAA ATGGTGAAGG CCAACGCCGG GTTCGTGAAG
ACGATTTGCC CGGAGACGGT GCACAATGAC TCACTCACCT ATGGCGACCG GCTGGCGAAT
ACGGCAATCC GCGGCGTGTG CCCGGAGTAT GGCACGATGC GCAACGAAGT TGCGGGCGAA
GGGCGCTGGC TCAACGCCAC CGACGAGGTC GAGCGGCGGC ATGTGGTGTT CCTTGGAAAT
GTCCTGAAGA CGCAGTTATT CAGCGGGCGC GACGCGGTCG GCGAAACCGT CTTGATCATG
GGGCAGCGCT TTACCGTGGT CGGCGTGATG GACCGCAAGA TGCAGCTCTC GAACTACTTT
TCGTCCGATG ATCGCTCGGC ATTCATTCCG CACTCCGCAG CGGGCGATCT GTGGGACACG
AAGTATGCAA GTGTGCTGGT ATTTGCGCCT ATCGCGCCGC AATATGAGAA GCGCGCGAGT
AAGCAAGTAT TGGCGGCAAT TGCCGAGCGC CAACATTTTT CGCCAAGTGA CGAAAAGGCG
ATCCAGATGT TCGGGCGCGA TGAATTTCGT CCGATCATTG ACGGACTGAC CATCGGGTTG
CAGGTGCTGC TGCTGTTCAT CGGCATGTTG ACGCTCGGAA TCGGCGGCGT GGGCGTGATG
AACATCATGC TGGTCTCGGT GGATGAACGC ATCCGCGAGA TCGGCCTACG GCGCGCGCTG
GGCGCGAAGA AGTGGCACAT CAAACTGCAG TTCCTGGCAG AGACGATGCT ACTGATGCTG
ATGGGCGGCG TGATCGGAAT CGGACTCTCT TACTTGCTGT CGTGGGCAGT GGGTACGCTG
CCACTGCTCG GCCCGTTGTT CGAAGACGAC AGCGGAAAGG GCGACATCCA CCTGCACATT
TCCATATTCA CGGTGCTTCT CTCAACGGCG GTGCTGGTGG TCACCGGGAT CGCCAGCGGA
CTGGTGCCGG CGTTCAAAGC ATCGCGTCTT GATCCCGTAG AGGCGCTCCG CTACGAGTAG
 
Protein sequence
MNMLKEVFIE SWHALARNRT RSSLTMLGIV WGITSVTLLI AYGSGFRKVL VDGFDAFGRS 
VVIAWPGQTS SQAGGQRAGQ KVRFEEADIE MVKANAGFVK TICPETVHND SLTYGDRLAN
TAIRGVCPEY GTMRNEVAGE GRWLNATDEV ERRHVVFLGN VLKTQLFSGR DAVGETVLIM
GQRFTVVGVM DRKMQLSNYF SSDDRSAFIP HSAAGDLWDT KYASVLVFAP IAPQYEKRAS
KQVLAAIAER QHFSPSDEKA IQMFGRDEFR PIIDGLTIGL QVLLLFIGML TLGIGGVGVM
NIMLVSVDER IREIGLRRAL GAKKWHIKLQ FLAETMLLML MGGVIGIGLS YLLSWAVGTL
PLLGPLFEDD SGKGDIHLHI SIFTVLLSTA VLVVTGIASG LVPAFKASRL DPVEALRYE