Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4631 |
Symbol | |
ID | 4070788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 5488978 |
End bp | 5490237 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637986671 |
Product | ABC efflux pump, inner membrane subunit |
Protein accession | YP_593705 |
Protein GI | 94971657 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATGC TGAAGGAAGT GTTCATCGAA AGCTGGCATG CGCTGGCGCG AAACCGCACC CGAAGTTCGC TCACGATGCT GGGCATTGTG TGGGGCATCA CCAGTGTGAC GTTGCTGATC GCCTACGGCA GTGGGTTCCG CAAAGTGCTG GTGGATGGGT TCGATGCATT CGGCCGCAGC GTGGTGATTG CGTGGCCGGG ACAGACGAGC TCGCAGGCGG GCGGACAGCG CGCCGGACAA AAGGTGCGCT TCGAAGAAGC CGACATTGAA ATGGTGAAGG CCAACGCCGG GTTCGTGAAG ACGATTTGCC CGGAGACGGT GCACAATGAC TCACTCACCT ATGGCGACCG GCTGGCGAAT ACGGCAATCC GCGGCGTGTG CCCGGAGTAT GGCACGATGC GCAACGAAGT TGCGGGCGAA GGGCGCTGGC TCAACGCCAC CGACGAGGTC GAGCGGCGGC ATGTGGTGTT CCTTGGAAAT GTCCTGAAGA CGCAGTTATT CAGCGGGCGC GACGCGGTCG GCGAAACCGT CTTGATCATG GGGCAGCGCT TTACCGTGGT CGGCGTGATG GACCGCAAGA TGCAGCTCTC GAACTACTTT TCGTCCGATG ATCGCTCGGC ATTCATTCCG CACTCCGCAG CGGGCGATCT GTGGGACACG AAGTATGCAA GTGTGCTGGT ATTTGCGCCT ATCGCGCCGC AATATGAGAA GCGCGCGAGT AAGCAAGTAT TGGCGGCAAT TGCCGAGCGC CAACATTTTT CGCCAAGTGA CGAAAAGGCG ATCCAGATGT TCGGGCGCGA TGAATTTCGT CCGATCATTG ACGGACTGAC CATCGGGTTG CAGGTGCTGC TGCTGTTCAT CGGCATGTTG ACGCTCGGAA TCGGCGGCGT GGGCGTGATG AACATCATGC TGGTCTCGGT GGATGAACGC ATCCGCGAGA TCGGCCTACG GCGCGCGCTG GGCGCGAAGA AGTGGCACAT CAAACTGCAG TTCCTGGCAG AGACGATGCT ACTGATGCTG ATGGGCGGCG TGATCGGAAT CGGACTCTCT TACTTGCTGT CGTGGGCAGT GGGTACGCTG CCACTGCTCG GCCCGTTGTT CGAAGACGAC AGCGGAAAGG GCGACATCCA CCTGCACATT TCCATATTCA CGGTGCTTCT CTCAACGGCG GTGCTGGTGG TCACCGGGAT CGCCAGCGGA CTGGTGCCGG CGTTCAAAGC ATCGCGTCTT GATCCCGTAG AGGCGCTCCG CTACGAGTAG
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Protein sequence | MNMLKEVFIE SWHALARNRT RSSLTMLGIV WGITSVTLLI AYGSGFRKVL VDGFDAFGRS VVIAWPGQTS SQAGGQRAGQ KVRFEEADIE MVKANAGFVK TICPETVHND SLTYGDRLAN TAIRGVCPEY GTMRNEVAGE GRWLNATDEV ERRHVVFLGN VLKTQLFSGR DAVGETVLIM GQRFTVVGVM DRKMQLSNYF SSDDRSAFIP HSAAGDLWDT KYASVLVFAP IAPQYEKRAS KQVLAAIAER QHFSPSDEKA IQMFGRDEFR PIIDGLTIGL QVLLLFIGML TLGIGGVGVM NIMLVSVDER IREIGLRRAL GAKKWHIKLQ FLAETMLLML MGGVIGIGLS YLLSWAVGTL PLLGPLFEDD SGKGDIHLHI SIFTVLLSTA VLVVTGIASG LVPAFKASRL DPVEALRYE
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