| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4627 |
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| Symbol | |
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| ID | 4070784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 5481290 |
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| End bp | 5484037 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637986667 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_593701 |
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| Protein GI | 94971653 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.618125 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGA TTCCACGTGC ACGTTCCTGG TTCCGTTCGG TGTCGCACGA CGCGCAGTTG
CAGCGCGATA TGGATGATGA GCTGCGCTTC CACGTGGAGA GCTACATCGA AGACCTGGTG
AAGAGCGGGG TTTCGCGCCA GGAGGCGACG CGGCGGGCGC GGATTGAGTT CGGCAGCGCG
GACGCGCACA AGGAAGCGAT GCGGGTTTCG TTGGGATTGC GGCTGTGGGA TGAGCTGCGG
TCGGACGTGC GGTATGCGGT GCGGATGTTG AAGAAGAGTC CGAGCTTCAC GGCGATTGCG
TTGCTGTCGC TGACGCTGGG GATTGGCGCG AACACGACGA TCTTCACCCT GGCAAAGCAC
TTGATGATCG ACCGGCTGAA CGTGCCGCAT CCGGAGCAGC TACGGCTGAT GAATTGGATT
TCGCCGAAGC ACGGCGCGGT GCATTCGATC TGGGGAGAGT GGGACAAGGA AAACGGCGGC
AACACGAGCA CATCGTTTTC GTACCCGGTG TATGAGTACC TGCGCGCGCA CAACCATCAA
CTCTCCGACT TGTTTGGGTT CAAGAATATT GGCCGCGCCA ATGTGACGAT TGATCAGGCG
GCCGAAGTGG TGCAAGCCGA TTTGGTGTCG GGCAATTTCT ATAGTGAACT GGGGATTGCG
CCGCAGATTG GCCGGGTGAT CGACGATGCG GACGACAAGC CGGGCGCAAC GCCGGTGGCG
GTGATCAGCG ATGGATACTG GGCGCGGCGC TTTGGGCGTT CGCCGGCGGT GCTAGGGAAG
ACGATCACGC TGAACCTGAC GCCGGTGACG ATTGTGGGCG TGAACCCGAA GGGCTTTACC
GGCGCGAGGC AGGTACAGAG TTCGTCCGAC ATTTACGTAC CGTTCAGCCT GCAGCCGCAG
GTAGCGCCGA ACTTCCGCTT TGGCTCGCTT TTGACGAACA CGCGCGAGTG GTGGATGCAG
ATCATGGCGC GCACCAAGCC GGGCGTAAAT GAAGAGGCGG CGCGCGCGGA ACTCGACATC
GCGTTGAAGG ACGCGGTGCG CGCCACGATG AATCCGAAGA AGGATGAAGC GCTGCCGACG
CTGCGCGTGG GCGATGGCAG CCGCGGCTTG AACGAAGCGG GACGAAACTT CGCGTCGCCG
GTGTACGTGT TGATGGCGCT GGTGGGATTT GTGCTGCTGC TGGCATGCGC GAACCTCGCG
AATTTGCTGC TGGCGCGGAC GTCGGCACGG CAGCGCGAGA TGTCGGTACG GCTGGCGATG
GGCGCTTCGC GGCGGCGGGT GCTGCGGCAG GTGCTCACCG AAAGCATGAT GCTCTCCCTG
CTCGGAGGCT TGGGTGGATT GCTGCTCGGC TACTTCGGAC GATTGGCGAT TCCCCACCTG
GTGACGAACG CTTGGGAAGA GCCGATGTCG GCGGCACCGT ACGATTGGAA GGTCTTCGCA
TTCAATCTCG GGCTGTCGTT GCTGACCGGA ATTTTGTTTG GCATCGCGCC GGCGTGGCAG
GCGACGCGCG CGGAGGTGAA CACGTCTCTG AAAGACAGCG CACAGAGTAC GACACGGCGC
CGGCGTGGAT ACGGTGGGAA AGCAGTGGTC GGATTCCAGA TCGCGCTCTC GACCGTGCTG
GTGTTGGGGT CGGGAATTTT TCTGCGGACG CTGGTGAACC TCACGTCGGT AGATCCGGGC
TTCGAGACCA AGAACCTTGT TCTGTTCGAG ATGCGATTGC CGCAAGCGCG GTATCCGGTG
GGCAAGGACC TGGTCCTCTA TCGCGACCTG GAGCAGCGCT TGGCGGCAAT ACCGGGCGTG
GATTCGGTGG GATTGTCGAG CGTGACGCTG TTAGCACACA GTATGTCGAA TGACGACTTT
GTGCCGACGG GCCAGAAGCC GGAACCCGGC AAAGAGACTG CCGCGGACGA CAACGCGGTG
AATGACGACT TCTTCAAGAC GATGCGGATC CCGATCCTTG CGGGACGAGC GTTCAACGCG
AGCGATACGG AGACCTCACA GAAAGTTGCG ATCGTAAACC AGGCGCTGGT AAAGCAGTTC
TGGCCGAATG AGAATCCGAT TGGGAAGACC TTTGAAACCA GCGGCAGCAA CGATAAGAAG
GAGTTGTTCA CGATCGTCGG GCTGTGCGCC GACACGCATT ACGACGACTT GCGCAAGGAG
CCGCCGCCGA CATTCTTCCT GAGCTATCGG CAGGCGTCGG ACATTTCGTG GGGGATGACA
TTTGAGATCA AGACGCGGCA ATCGCGCGCG GCGATTACGC CAATGTTGCG CGAGGCCCTG
CGGTCGGTGG ACCGTGACCT GCCGCTGACC GATGTCCGTA CGCAGGACGA ACAGATTGAC
GGCCTGCTGC AGCAGGAGAG ACTGTTCGCG ACGATCACTG GCGCGTTCGG CGTGCTGGCG
CTGGTGTTGG CTTGCATCGG GATTTACGGG ATCATGTCGT ATAACGTAGC GCGGCGAACG
AACGAAATTG GGATTCGCCT GGCGCTGGGC GCGAAGACAC AACAGGTGCT GGCGATGGTG
CTCAGAGAGG CATCGTGGCT GGCGATCGTG GGAGTTGTCG TGGGACTCGG CGCGGGATTG
GCGCTGGTGC GGCTGATTCG CACAATGTTG TATGGAATGA AGCCGTGGGA CCCGGTGAGC
ATTGCGATCG CGGCGGGATT GTTGTTGGGG GTTTCGCTGA TCGCCGGATA TGTGCCGGCG
AGAAGAGCGT CGAAGGTTGA GCCGATGGTG GCGCTGCGGC ATGAGTAG
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| Protein sequence | MKLIPRARSW FRSVSHDAQL QRDMDDELRF HVESYIEDLV KSGVSRQEAT RRARIEFGSA
DAHKEAMRVS LGLRLWDELR SDVRYAVRML KKSPSFTAIA LLSLTLGIGA NTTIFTLAKH
LMIDRLNVPH PEQLRLMNWI SPKHGAVHSI WGEWDKENGG NTSTSFSYPV YEYLRAHNHQ
LSDLFGFKNI GRANVTIDQA AEVVQADLVS GNFYSELGIA PQIGRVIDDA DDKPGATPVA
VISDGYWARR FGRSPAVLGK TITLNLTPVT IVGVNPKGFT GARQVQSSSD IYVPFSLQPQ
VAPNFRFGSL LTNTREWWMQ IMARTKPGVN EEAARAELDI ALKDAVRATM NPKKDEALPT
LRVGDGSRGL NEAGRNFASP VYVLMALVGF VLLLACANLA NLLLARTSAR QREMSVRLAM
GASRRRVLRQ VLTESMMLSL LGGLGGLLLG YFGRLAIPHL VTNAWEEPMS AAPYDWKVFA
FNLGLSLLTG ILFGIAPAWQ ATRAEVNTSL KDSAQSTTRR RRGYGGKAVV GFQIALSTVL
VLGSGIFLRT LVNLTSVDPG FETKNLVLFE MRLPQARYPV GKDLVLYRDL EQRLAAIPGV
DSVGLSSVTL LAHSMSNDDF VPTGQKPEPG KETAADDNAV NDDFFKTMRI PILAGRAFNA
SDTETSQKVA IVNQALVKQF WPNENPIGKT FETSGSNDKK ELFTIVGLCA DTHYDDLRKE
PPPTFFLSYR QASDISWGMT FEIKTRQSRA AITPMLREAL RSVDRDLPLT DVRTQDEQID
GLLQQERLFA TITGAFGVLA LVLACIGIYG IMSYNVARRT NEIGIRLALG AKTQQVLAMV
LREASWLAIV GVVVGLGAGL ALVRLIRTML YGMKPWDPVS IAIAAGLLLG VSLIAGYVPA
RRASKVEPMV ALRHE
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