Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4626 |
Symbol | |
ID | 4070783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 5480949 |
End bp | 5481293 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637986666 |
Product | PadR family transcriptional regulator |
Protein accession | YP_593700 |
Protein GI | 94971652 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR03433] transcriptional regulator, Acidobacterial, PadR-family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.658032 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAATA AGCCGCTCGA TCTTCTGCAA GGCACATTGG ACATGCTCAT CCTCAAAGCT GTATCGCTGG GGCCGCTGCA TGGGTATGGG GTTTTGCTGC GCATTCAGCA GATTTCCGGG CAGCAACTGG AGATCCAGCA GGGGTCGTTG TATCCGGCGT TGTACCGGCT GGAGCACCAG GGGGCGATTG CTTCCGAGTG GGGCGAGAGT GAGAACAATC GTCGCGCGAA GTATTACGAG CTGACCACCT CGGGGCGGGC GATGCTGCGC AGCGAGACTG CCAAGTGGAA CCGCATGAGC GCAATCATTG GCGGCATTTT GCAGGCTGCG CCGGAGGAAG TATGA
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Protein sequence | MGNKPLDLLQ GTLDMLILKA VSLGPLHGYG VLLRIQQISG QQLEIQQGSL YPALYRLEHQ GAIASEWGES ENNRRAKYYE LTTSGRAMLR SETAKWNRMS AIIGGILQAA PEEV
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