Gene Acid345_4626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4626 
Symbol 
ID4070783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5480949 
End bp5481293 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content59% 
IMG OID637986666 
ProductPadR family transcriptional regulator 
Protein accessionYP_593700 
Protein GI94971652 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID[TIGR03433] transcriptional regulator, Acidobacterial, PadR-family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.658032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAATA AGCCGCTCGA TCTTCTGCAA GGCACATTGG ACATGCTCAT CCTCAAAGCT 
GTATCGCTGG GGCCGCTGCA TGGGTATGGG GTTTTGCTGC GCATTCAGCA GATTTCCGGG
CAGCAACTGG AGATCCAGCA GGGGTCGTTG TATCCGGCGT TGTACCGGCT GGAGCACCAG
GGGGCGATTG CTTCCGAGTG GGGCGAGAGT GAGAACAATC GTCGCGCGAA GTATTACGAG
CTGACCACCT CGGGGCGGGC GATGCTGCGC AGCGAGACTG CCAAGTGGAA CCGCATGAGC
GCAATCATTG GCGGCATTTT GCAGGCTGCG CCGGAGGAAG TATGA
 
Protein sequence
MGNKPLDLLQ GTLDMLILKA VSLGPLHGYG VLLRIQQISG QQLEIQQGSL YPALYRLEHQ 
GAIASEWGES ENNRRAKYYE LTTSGRAMLR SETAKWNRMS AIIGGILQAA PEEV