Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4616 |
Symbol | |
ID | 4070773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 5468327 |
End bp | 5469175 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637986656 |
Product | protein of unknown function, zinc metallopeptidase putative |
Protein accession | YP_593690 |
Protein GI | 94971642 |
COG category | [R] General function prediction only |
COG ID | [COG2321] Predicted metalloprotease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.16102 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATTGGA CACCCGGCGG ACGCAGCGGC GACCTCGAAG ATCGCCGTGG CGACAGTGGC GGCGGCGGTT TCGGACTGCC GCACCTCGGC ATTGGCGGAT TGCTCCTCAT CGGCGTTCTC AGCCTGATCT TTCATAAGAA CTTCTTCGCG CTGCTCAGTG GCGGCTCTGC AACCACTGCG CCGACGACGC AAACACGTCC TGTCAATGAC GCGGGCGAAG AGCGCGAGGT GCAGTTCGTC TCCTTCGTGC TCGACGACGT GCAGAAGACC TGGGCGCAAA CCTTCGCACA GCAAGGTCGC ACTTATCGTC ACGCCAAGCT GGTGCTCTAT CGCGACTCGT TGCCGTCGGG ATGCGGAATG GCGCGCTCGG CGACTGGCCC GTTCTACTGT CCCACTGACC AGAAGGTCTA CATCGACCTC GGATTTTTTG ATGAACTCAA GCGCCGCTTC GGCGCGCCAG GCGAGTTTGC GCAAGCGTAC GTCATCGCGC ATGAGCTCGG ACATCACGTA CAGAACCTGC TCGGCATAGA GCAGCGCGTC GAGGGCGCGA TGCGCAGCGG CAGCAAGACC CAGGCCAACG CCGCATCGGT GAAGCTCGAG TTGCAGGCCG ACTGCTTCGC CGGCGTTTGG GGCCATTCCA CCGAGCAGCG CAAGATGGTC GACCAGGGTG ACTTCGAGGC AGCGATGAAA GCGGCTGCGG CAGTAGGCGA CGATCGCCTC GAGCGCATGG CTGGGCAAAA CGTCAGCCCC GAGTCGTTCA CCCACGGCTC GTCCGAGCAG CGCATGCACT GGTTCCAGCA AGGCTTCCAA AGCGGCGATA TTTCGGCTTG CAATACGTTC GGGCAGTAA
|
Protein sequence | MDWTPGGRSG DLEDRRGDSG GGGFGLPHLG IGGLLLIGVL SLIFHKNFFA LLSGGSATTA PTTQTRPVND AGEEREVQFV SFVLDDVQKT WAQTFAQQGR TYRHAKLVLY RDSLPSGCGM ARSATGPFYC PTDQKVYIDL GFFDELKRRF GAPGEFAQAY VIAHELGHHV QNLLGIEQRV EGAMRSGSKT QANAASVKLE LQADCFAGVW GHSTEQRKMV DQGDFEAAMK AAAAVGDDRL ERMAGQNVSP ESFTHGSSEQ RMHWFQQGFQ SGDISACNTF GQ
|
| |