| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4603 |
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| Symbol | |
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| ID | 4070760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 5450933 |
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| End bp | 5453101 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637986643 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_593677 |
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| Protein GI | 94971629 |
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| COG category | [G] Carbohydrate transport and metabolism
[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase
[COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.524488 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGTC TTTTCATGAA CCCAAAAGCT CTCTCGTCCA CTTTGGCCGT GCTGCTGTTG
TCTGCCACGG CGAGCCTTGC ACTGCCGAAT GGGCCTACTT TGTTGGCTCA GCAGAAGCAG
GACGCGCCGA CGCCAACCGC TCCGGCCAAG CCGAATGCGG CCCAGCCAAC TTCGAATCCG
GAAGCCGACG CCAAGAAACC AGCCAATCGC GCTGACGCCT ACTACCACTA CACGATGGCG
CACATGTACG AGGAAATGGT GGCGACGTAC GGCCGCGCCG AGTACGCGAA CAAGGCGATT
GAGGAATACC GCGCGGCGAT CACCGCCGAT CCGTCGTCGG ACTATTTAAA CGCCGGACTG
GCCGATCTTT ACTGGCGCAC GGGCCGCATT CGCGACGCGG TGCTGGAAGC GCAGGAGATC
CTGAAGCGCG ATCCGAAGAA CGTGGATGCG CACCGCCTGC TCGGGCGTAT TTACCTGCGT
TCTTTGGGCG ACATGCAGAG CGGCAATAAC CAGTCTCGCG ACATGCAGCG GCTGGCGATT
GAGCAGTACG AAGAGATCGT GAAGCTCGAT CCGACGAGCG TGGAAGACCA TCTGCTGCTC
GGTCGCCTGT ATTCGTACAG CAACGACCTG ACCAAGGCCG AGAAGGAATT CAAGACCGCC
GTCCAGATCC AGCCGGATTC CGAAGAAGCT GTGACCATGC TGGCGTACCT CTATACGCAG
GAAGGCGACA CCAAGAAAGC GCAAGAGGTG CTGAGCAACA TTCCCGACGA CGATCGCAGC
GCGAAGCTGT ATTCGACTCT GGGCTACACC TACGAAGAGC AGAAGGATTA CAAGAAGGCG
ATCGAGGCAT ACCGCAAGGC GGTGATGCTC GATAAAGAGA ACCTCGACTC CGTCCGCGGG
CTGGCGCAGA ACCTGTTGAA TGACGGGCAG CTCGATGCCG CGCTGGAGCA GTACAAGATC
ATCGTTGATC AGGACCCGAG TGACGCTCAG AGCTACCAGC ACATCGCGGA GATCGACCGC
CGCAACGGCA AGTTCGAAGC TGCGCTCGAT GCGCTGAAGA AGGCCTCCGC ACTAGTGCAG
GATTCGCAGG AGATCCCGTA CAACATGGCG GTGATCTACG AGGGCCAGGG CCGCTACGAA
GACGCCATCA ATACCATCCA GCAGCTTCTT ACGAAGACCG ATAAGCCGGA TGCGTCCTAC
AGCTCGGCCG ATCGCAGCAA CCGTTCGATC TTCCTCGAGC GGCTGGGCAA CATCTATCGT
GAGGCGAACA AGCCGCAGCA GGCGGTGGAG ACCTTCCGGC GGATGATCGC GCTCGGTGAC
GATCCGGCCT CGCGTGCTTA CCAGGAGATG GTGGAGACCT ATCGCGATAA TCGCGATTGG
CCGTCAGCCA CAGCAGCGGC GCAGGAAGGC GCAAAGAAAC TTCCCAAAGA TCGCGGGCTG
CAACTAGTTC TCGCCGCGCA ATTGGCGGAT GAAGGTAAGG CCGACCAGGC GCTGAGTATT
GCGAAGTCGC AACTCAATGG CAAGGCCGCC GATGACCGCG AAGTGTACGT GTCTCTGGCG
CAGATGTACA CGCGGTTGAA GAAGTATCCC GAAGCGGAAG ACGCGATCGC GCAGGCGATG
AAGCTTGCAG GCACGCAGGA TGAACGGAAC TACGTCACGT TTGTGCAAGG CTCGATCTAC
GAGCGTGAGA AGAAATTCGA ACAAGCGGAA GAGGCCTTCC GTAAGGTCAT CAATGCCGAT
CCGAAGAACG CCGGCGCGCT GAACTACCTG GGTTATATGC TGGCCGACCG CGGCACGCGC
CTCGAAGAAG CGCTTGGCAT GCTGCGCAAG GCCGTGCAGA TGGAACCGCA GAACGGCGCG
TATCTCGACT CGCTGGGCTG GGCCTACTTC AAGATGGGCA ACTACGAGCA GGCGGAAGAG
AACCTGCGCA AAGCGTCCGA CAAGATCGGC AGCGATCCGA CGGTGCAGGA CCACCTTGGC
GATCTTTATC AGAAGACGGG GCGCCTGAAG CTGGCGGCCA CGCAGTGGGA ACGCGCGCTG
GACCAGTGGA ACCACTCAGT GCCGGCAGAA GTTGACGCCG ATGATGTGGC GAAGGTGCAG
AAGAAGCTGG AGTCGGCGAA GATCAAGCTG GCACAGCAGA CCTCGACGAC TTCTAACACG
AAGCAGTGA
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| Protein sequence | MAGLFMNPKA LSSTLAVLLL SATASLALPN GPTLLAQQKQ DAPTPTAPAK PNAAQPTSNP
EADAKKPANR ADAYYHYTMA HMYEEMVATY GRAEYANKAI EEYRAAITAD PSSDYLNAGL
ADLYWRTGRI RDAVLEAQEI LKRDPKNVDA HRLLGRIYLR SLGDMQSGNN QSRDMQRLAI
EQYEEIVKLD PTSVEDHLLL GRLYSYSNDL TKAEKEFKTA VQIQPDSEEA VTMLAYLYTQ
EGDTKKAQEV LSNIPDDDRS AKLYSTLGYT YEEQKDYKKA IEAYRKAVML DKENLDSVRG
LAQNLLNDGQ LDAALEQYKI IVDQDPSDAQ SYQHIAEIDR RNGKFEAALD ALKKASALVQ
DSQEIPYNMA VIYEGQGRYE DAINTIQQLL TKTDKPDASY SSADRSNRSI FLERLGNIYR
EANKPQQAVE TFRRMIALGD DPASRAYQEM VETYRDNRDW PSATAAAQEG AKKLPKDRGL
QLVLAAQLAD EGKADQALSI AKSQLNGKAA DDREVYVSLA QMYTRLKKYP EAEDAIAQAM
KLAGTQDERN YVTFVQGSIY EREKKFEQAE EAFRKVINAD PKNAGALNYL GYMLADRGTR
LEEALGMLRK AVQMEPQNGA YLDSLGWAYF KMGNYEQAEE NLRKASDKIG SDPTVQDHLG
DLYQKTGRLK LAATQWERAL DQWNHSVPAE VDADDVAKVQ KKLESAKIKL AQQTSTTSNT
KQ
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