Gene Acid345_4600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4600 
Symbol 
ID4071545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5446992 
End bp5448413 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content59% 
IMG OID637986640 
Productpeptidase M20 
Protein accessionYP_593674 
Protein GI94971626 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACACGTT TTAACCGGAC TCTGTTCACC TGTCTGTTGT TCGCGGCCGC TGCTTTCGCC 
CAAACCGAGA ACAAGCTACC ATCCGCGGCC ATCCCCGCCG ATCGTATGAC GCAGTACTCC
GACCAGGCCG TTACGTGGAT GCGCGACTAC CTCCGCGTGA ACACTTCGAA TCCTCCGGGT
AATGAGCTTG CTGCAGCGCA ATTCTTCAAA AAGATCCTGG ACGAAAACGG CATCGAGAAC
CAGCTCTTCG AATTCACTCC GGGCCGCGCC AATATATGGG CACGCATCAA GGGCGACGGC
ACGCACCGGC CCCTGATCCT GCTCAGCCAC ATGGACGTCG TCACCAGCGA TCCCGACAAG
TGGAAGGTCA ACCCCTTCAG CGCCGAGATT ATTGATGGCG CCATCTACGG CCGCGGCGCG
CAGGACATGA AGAATGAAGG ACTCGCGCAA CTCGTAGTGA TAGTGATGCT CAAGCGCGAA
GCCGTGAAGC TGGACCGCGA CATCATTCTG CTCGCTACCA GCGACGAAGA AGTCGACGGC
ATCGGCACCG ATTGGATGAT CGCCAACAAA CGCGACATGC TGGAGAATGC CGAGTTTCTC
ATCACCGAAG GCGGCACGAA CTTAATGAAG GAGGGCCACG TCGAATCTGT GGGCGTAGAT
GTCGCCGAGA AATCGCCCTT CTGGCTCAAG CTCACCGCGC ACGGCGTTCC GGGCCATGCA
TCGATTCCGC TGGCGGATTC CGCGCCTAAT CGGCTGATCC GCGCATTGTT CAAGGTCATT
AACTATCAGA CGGAGTTGAA AGTTCTGCCG GTCGTCGAAG AGCACTTCAA AGCGCTCGCG
CCGACGCAGA AGGGCGACAT CGCCGAGAAA TTCCGCGACA TCCGCATGGC GCTCAAGGAC
AAGAGTTTCG CTGCGCGCAT GTCGGCGGAC ACTGAATACG CCTACCTGCT GCGCAACACC
ATTTCAGTCA CTCAGCTCGA AGCCTCGCAC CAGACCAATG TCATTCCCAC CGAGGCCACG
GCGCACCTCG ACGTCCGCCT GCTGCCCGGT GAAGACTCGC ATGCATTTCT TGAAATGATG
AAGCGCGTGG TGGACGACCC GAAAGTCACC GTCGAGCCCG AAAGCTCTGA CTTCCGCAAA
GCCAACGCCT CCGACGTCCA TACCTCGCTG TTCGACATAT TCCGCGAGAT CTCGGCGTCC
TACTTCCCTG ATGCGCCGGT GGTTCCGACC ATCACCAGCG GCTACACCGA GAACCAGCGC
TACCGCAGCA TCGGCATCAG TTGCTACGGC TTTACGCCGT ATGCCGCGAC AAAAGAAGAA
AGCTCTACGG AGCACGGGAA TAACGAGCGC GTCCGGGTAG AAGAAGTGCG AAGGGCGCCG
AAGATTTTGT TCGATGTTGT GGCGACGCTG GGCTCGCGCT AG
 
Protein sequence
MTRFNRTLFT CLLFAAAAFA QTENKLPSAA IPADRMTQYS DQAVTWMRDY LRVNTSNPPG 
NELAAAQFFK KILDENGIEN QLFEFTPGRA NIWARIKGDG THRPLILLSH MDVVTSDPDK
WKVNPFSAEI IDGAIYGRGA QDMKNEGLAQ LVVIVMLKRE AVKLDRDIIL LATSDEEVDG
IGTDWMIANK RDMLENAEFL ITEGGTNLMK EGHVESVGVD VAEKSPFWLK LTAHGVPGHA
SIPLADSAPN RLIRALFKVI NYQTELKVLP VVEEHFKALA PTQKGDIAEK FRDIRMALKD
KSFAARMSAD TEYAYLLRNT ISVTQLEASH QTNVIPTEAT AHLDVRLLPG EDSHAFLEMM
KRVVDDPKVT VEPESSDFRK ANASDVHTSL FDIFREISAS YFPDAPVVPT ITSGYTENQR
YRSIGISCYG FTPYAATKEE SSTEHGNNER VRVEEVRRAP KILFDVVATL GSR