Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4586 |
Symbol | |
ID | 4071531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 5433740 |
End bp | 5435377 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637986626 |
Product | ABC transporter, ATPase subunit |
Protein accession | YP_593660 |
Protein GI | 94971612 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.479902 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCTCTT TCTCAAACAT TAATAAGCAG TACGGCAAGC AGTTGCTCTT TGTAGACGCT TCGTTCCAAT TGAATCCCGG CGAAAAAGTC GGACTCGTTG GCCCCAATGG TGCAGGCAAA ACAACGCTCT TCCGTATGGT GGTCGGCGAA GAAGCTCCCG ACGAGGGCGC GGTCTCTGTC CCCAGGAAGA TAACGATCGG CTACTTTCGC CAGGACGTGG AAGAAATGCA GGGCCGCTCG GTCCTGGATG AAGCGATCGC CGGCAGCGGC CGCGTCGGAA ATCTGCACCA CGAGCTCGAA GCCCTGCATC AGGAAATGTC CGACCCCGAC AAGACGGATG AAATGGACCG CATCCTTGAG CGCTTCGGTC ACGTTCAGGA GGAGTACGAG CACCTAGGCG GTTACGCGCT CGAGTCGCAG GCCCGCGAGG TGCTCCACGG ACTGGGATTC AAAGATGACC AGATTGACGG CGACGTGGGA GCGCTCTCCG GCGGATGGAA GATGCGGGTT GCGCTGGCAC GGGTCCTGCT CGGCATGCCG GATGTCTTGC TGATGGACGA ACCGACGAAC CACCTCGACA TCGAATCCAT CATCTGGCTG GAGAAATTCC TGAAATCGTT TCCCGGCGCG CTGCTCATGA CCTCGCACGA CCGCGAGTTC ATGAACCGCC TGGTCTCAAA AATCGCGGAG ATCGATGGCG GCGAGATCAT CACCTACTCC GGCAACTACG ATTTCTACGA GCGCGAGCGG GCCATCCGCG AAACCAACCA GCAGGCCGCG TTCGCGCGCC AGCAGTCCAT GCTGGCTAAG GAGCAGCGCT TCATCGACCG TTTCAGGACG CACGCGGCCA AAGCAGCGCA GGTGCAGAGC CGCATCAAGG CCTTGGACAA AATCGAAAAG ATTGAATTGC CGAAGAAGCG CCAGGTAGTG AAGTTCGATT TTCGTGTCCC CCCGCGTTCT GGCGAACAGG TGGCCGTCCT TGAAAATCTG CACAAGAGTT ACGGGCCGCG CGTGATTTAT GAAGGATTCA ACCTCACCAT CCGTCGCGGA GAACGCTGGG CGGTGATGGG AAGAAACGGC GCGGGCAAGA CCACGCTGCT CAAGATGATT GCCGGGGCCA GTGCTCCCGA TGCCGGAAAC GTGCGCCTCG GCGCCAGCCT GTACATGGGC TACTTCGCGC AACAATCTCT CGACGTGCTC AATCCCGATC TCACCGTCAT CGAACAGCTA CAACAAGATT TTCCCCAGGA CGGTCTCGGA GTGCTGCGCA ACCTGGCCGG CGCATTCCAG TTCTCGGGCG ACGATGTAGA TAAGAAAATC CGCGCCCTGT CCGGCGGAGA AAAGTCGCGG CTGGCAATCG CCCGCATGCT CTATAACCCG CCCAACTTCC TGGTGCTCGA CGAACCAACG AACCATCTTG ATCTTGCGAC CAAGGAGATG CTGGTAGACG CCCTGAAAGA TTTCGAAGGC ACCATGATCT TCGTATCGCA CGACCGCACG TTCCTGCGCG GTCTCGGCTC ACGTGTGCTG GAACTGGGCG GTGAGAACGG CACCGACCGC CATCCCACCG TGTATCCAGG CTCCTACGTC GAGTACGTGC AGAAGCTTGG ACATGAGGCG CCGGGGATCT ATTCGTAG
|
Protein sequence | MISFSNINKQ YGKQLLFVDA SFQLNPGEKV GLVGPNGAGK TTLFRMVVGE EAPDEGAVSV PRKITIGYFR QDVEEMQGRS VLDEAIAGSG RVGNLHHELE ALHQEMSDPD KTDEMDRILE RFGHVQEEYE HLGGYALESQ AREVLHGLGF KDDQIDGDVG ALSGGWKMRV ALARVLLGMP DVLLMDEPTN HLDIESIIWL EKFLKSFPGA LLMTSHDREF MNRLVSKIAE IDGGEIITYS GNYDFYERER AIRETNQQAA FARQQSMLAK EQRFIDRFRT HAAKAAQVQS RIKALDKIEK IELPKKRQVV KFDFRVPPRS GEQVAVLENL HKSYGPRVIY EGFNLTIRRG ERWAVMGRNG AGKTTLLKMI AGASAPDAGN VRLGASLYMG YFAQQSLDVL NPDLTVIEQL QQDFPQDGLG VLRNLAGAFQ FSGDDVDKKI RALSGGEKSR LAIARMLYNP PNFLVLDEPT NHLDLATKEM LVDALKDFEG TMIFVSHDRT FLRGLGSRVL ELGGENGTDR HPTVYPGSYV EYVQKLGHEA PGIYS
|
| |