Gene Acid345_4582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4582 
Symbol 
ID4071527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5430335 
End bp5430910 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content58% 
IMG OID637986622 
ProductTetR family transcriptional regulator 
Protein accessionYP_593656 
Protein GI94971608 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.278118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTACG AACCGGAACA CAAGAAGCGG ACTCGAGATC GAATTGTACG GAATGCTGCC 
CGCAAACTGC GCGCCGAGGG GTTGGGCGGG CCTGGCGTCG CCAGCGTGAT GAAGGCGTCT
GGATTGACCG TGGGCGGCTT TTACAAGCAC TTTCGGGGAA AGGACGAGCT TCTCGCCGAA
GCGGTTGCGC TGGGATTCGC GGAGATTGGT GAGACGGCCC ATGCCGTGCT GAAAAATGTG
CCGCGTGAGG ACTGGTGGAA AGAAGTTGTT CGATGGTACC TCTCGTCCGA GCATTGCGAT
CATCCCGCCA CCGGTTGCCC GGTTGCAGCA TTGGCGTCTG AGATAGGCCG AGCCAAAGTT
GGTTTCAAGG AACGAATATC CGGCCAGGTA AAAAGACTCA CTGAGCAGTG GGCAGAGCTG
ATGCCGGGAG CGAACGCGAC AGAGCGCGAG CGAAACTTCT TCGCGATTTA CAGCGCGATG
GTGGGTGCGT TGTCCGTTGC CCGACTATTC ACGGACCCTG CTGACCGGGA AAAAGTGCTG
GCGAGCGCAC GAGATCATCT TTTGCGAAGC TTTTGA
 
Protein sequence
MRYEPEHKKR TRDRIVRNAA RKLRAEGLGG PGVASVMKAS GLTVGGFYKH FRGKDELLAE 
AVALGFAEIG ETAHAVLKNV PREDWWKEVV RWYLSSEHCD HPATGCPVAA LASEIGRAKV
GFKERISGQV KRLTEQWAEL MPGANATERE RNFFAIYSAM VGALSVARLF TDPADREKVL
ASARDHLLRS F