| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4580 |
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| Symbol | |
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| ID | 4071525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 5428245 |
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| End bp | 5429192 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637986620 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_593654 |
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| Protein GI | 94971606 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.308792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.669632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTTC GTCATTTGCG TTATTTCATT GCCGTTGCCG AAGAGGGCAG CCTCACGAAT
GCCGCCGAGC GGCGGTTGCA CACGACCCAG CCATCGTTAA GCCGGCAGCT TCGAGATCTC
GAATTGGAGA TCGGCGTAAA GCTGCTGGAG CGCAAGACAC GAGGCGTTGC GCTCACTGCG
GCGGGCCGGG TATTTCTCGA TCACGCACGG CTGGCGTTGA TGCAAATTGA AGTGGCATGC
GACGCCGCAC GGGGTACGGA ACGGCCCGAG GAGAAGCCAA AGTTTGTCAT TGGCTTTTTG
CTGGGACAGG AAGCAATCTG GCTGTCAGAG TCGCTGCGCA TTTTGCGGGA GGAGGCGCGA
GACGTTGAGA TTACGCTCAT GACAAAGTCC TCCCCTGAGT TGGCAGTCGG GCTGATGCAA
GGCAAGATCG ACGTTGCCCT GCTGCGGCGT GAGGTGAACA CCGTAGGCCT GGCTTTCAGA
TTCTTGAGTA AGGAACCTCT GATTGCGATA CTACCTACGC GCCATCGCCT GGCCGGGCTC
AGGACGGTGC CGCCGCAGGA TCTCGCACGC GAGAGTTTCA TCAGCACAGC GCGCGCCGCG
CCCGTTCTCA AGTCCGTCAT CGATCACTAT GCGGCAAAGA CTGGAATCAC TCTGAACGAG
CACTACGATG CCGAGACCTT GTCCGGCGGG ATGTCGTTGG TGGCATCGAC TGGCGGTTTC
ACACTTCTTC CACTCTATGC GCAAAATGCG CTGATCCCGT CAGTCGTTGC CCGTCCCTTG
CGTGGCGAGA TTCCGACCAT CGGCCTGATG ATGGGCTATA ACAAGTCGAA CACTTCTCCG
TTGCTCAAGA GATTTCTTCT TCGCGCTGAT CAATTAGTCA GCCGTGTTTC GCAGGGTGAT
GCTTACCCCC GCACCTGGAA AAGGGGTGGC CGCAAGCCGT CAGTCTAA
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| Protein sequence | MELRHLRYFI AVAEEGSLTN AAERRLHTTQ PSLSRQLRDL ELEIGVKLLE RKTRGVALTA
AGRVFLDHAR LALMQIEVAC DAARGTERPE EKPKFVIGFL LGQEAIWLSE SLRILREEAR
DVEITLMTKS SPELAVGLMQ GKIDVALLRR EVNTVGLAFR FLSKEPLIAI LPTRHRLAGL
RTVPPQDLAR ESFISTARAA PVLKSVIDHY AAKTGITLNE HYDAETLSGG MSLVASTGGF
TLLPLYAQNA LIPSVVARPL RGEIPTIGLM MGYNKSNTSP LLKRFLLRAD QLVSRVSQGD
AYPRTWKRGG RKPSV
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