Gene Acid345_4579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4579 
Symbol 
ID4071524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand+ 
Start bp5427530 
End bp5428168 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content63% 
IMG OID637986619 
ProductGreA/GreB family elongation factor 
Protein accessionYP_593653 
Protein GI94971605 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01461] transcription elongation factor GreB 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.063222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.427466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAG GTTTTACGAG ACATCCCCAA TCGAATGAGC CCGCGACCCG CGTCAAGAAC 
TACATAACGC CGGGCGGGCT CGAGCGCCTG AAAGATGAGC ACCGGTTTCT GCTCACCCGG 
GAGCGTCCGG CGGTGGTGGA AGTGGTGCAG TGGGCTGCCG GCAATGGCGA TCGCAGCGAC 
AACGCCGACT ATCGCTACGG CAAGCGTCGG CTGCGGCAGA TCGATGGGCG GATCCGTTTT 
CTCTCGAAGC GAATCGAAGC GGCGGAATTG GTGGACCCGG AGCGTCCGAG AACGGGGCAG 
GCAGCGACCA GGGCTTTCTT CGGAGCGACG GTGCGCTATG AGAACGCCGC GGGCGTGGAG 
CGAGTGGTGA GCATCGTGGG CGTCGACGAG GTCGACCTCA GCCGCAACCA CATCAGCTGG 
ATGTCGCCCC TGGGGCGCGC GCTGACCAAG TCGGCAGAGG GCGACAGCGT AGTCCTAAAA 
GCGCCGGGCG GCACCGAAGA ACTGACCGTG CTGGAAGTGC GCTACGAGCG CATTGCTGTG 
GAGGCGTTCC GTGAGCCGGC TGGATCCGAG GTGTCGGGAA GGCACTCGCG GGCCAACGCT 
CATCCGCCGG AAGAAGAAGA TAAGGAAAGA TCGAGATAA
 
Protein sequence
MQKGFTRHPQ SNEPATRVKN YITPGGLERL KDEHRFLLTR ERPAVVEVVQ WAAGNGDRSD 
NADYRYGKRR LRQIDGRIRF LSKRIEAAEL VDPERPRTGQ AATRAFFGAT VRYENAAGVE 
RVVSIVGVDE VDLSRNHISW MSPLGRALTK SAEGDSVVLK APGGTEELTV LEVRYERIAV 
EAFREPAGSE VSGRHSRANA HPPEEEDKER SR