Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4577 |
Symbol | |
ID | 4071522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 5425482 |
End bp | 5426546 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637986617 |
Product | secretion protein HlyD |
Protein accession | YP_593651 |
Protein GI | 94971603 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.231546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.47776 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCCAA ACAAGTTCTT CATATTTCTC GGTGTACTAG TAATTCTCGC GACAGCCTTC TATTTCCTTA CTACCAACCG TTCCGGCGAC GAGGTCCTGA TCGGAGTGGT GGACGCCAAC AATGTTGTCG TCAGCTCCAG AATCATGGGC CGCATTGAGC GCCTCGCCGT GGATGAAGGT ACCCCCGTGA AGCAGGGCGA CCTGATTGCC GTGATTGACT CCGGGGAATT GCAGGCCCAG AAAGCCGCCG CCGAAACGAC CATCGCCAGC TATCGCGCGC GAGTTTCCCA GGCGCGCGCC GGCGCTACGC AAGCCGAAGG CGAAACCGCC AGCCAACTCA CCACCGCACA AGCACGCTTA CAGGCCGCAC GTTCCGCCTA CGCGCAATCA CAAGCTGATC TAGATCGCGT GAAGAGTGAC GCTACCCGCC TCATCGAGTT GGCAAAGCAG GGCGTGGCTT CGAAAGCCGA TCAGGAGCGT TCCGACGCGC AACTCAAGAT GGCGCAAGCC GCGGTACAGA ACGCATCCGA CCAGATCCGC GCTGCGGAAT CGGACGTGAA AACCTACCAG GCGCGCCTCG AACAGGCGAA AGCCGCGCAG AGCACGTTGG CCGGCAGCCA GGAAGATGTG AAGACCGCTG AAGCCCAGCT CACCGAAGCG GAGACGCGTC TCGGCTACAC GCAGGTCGTC GCTCCGGTAA CCGGCGTCGT GAACGTGCGC GCCGCGCGTG AAGGCGAGGT CGTCAATCCC GGGCAGGCGA TCGTCACGGT CGTGGATTAC GGCGACACCT GGGTCTATGC GCCGCTTCCG GAAACCGATT CTGGCGGCAT CAATCTTGGC GACACACTCA CCGTCCGTTA TCCGTGGAAC GCGACGGAGC AGGGCAAGGT CATCTACAAA GCCGCCGAAG CCGACTTCGC CACCCAGCGT GACGTGAGCC GTACCAAGCG CGACATCAAG ACCATCGCCA TCAAGGTCCG CGTGCAGAAC AACCAACAAG GCAAGCTCGT GCCCGGCATG ACCGCCGAAG TGCTGGTGCC GAAGAGCAAA CAGGGTGGCC AATGA
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Protein sequence | MKPNKFFIFL GVLVILATAF YFLTTNRSGD EVLIGVVDAN NVVVSSRIMG RIERLAVDEG TPVKQGDLIA VIDSGELQAQ KAAAETTIAS YRARVSQARA GATQAEGETA SQLTTAQARL QAARSAYAQS QADLDRVKSD ATRLIELAKQ GVASKADQER SDAQLKMAQA AVQNASDQIR AAESDVKTYQ ARLEQAKAAQ STLAGSQEDV KTAEAQLTEA ETRLGYTQVV APVTGVVNVR AAREGEVVNP GQAIVTVVDY GDTWVYAPLP ETDSGGINLG DTLTVRYPWN ATEQGKVIYK AAEADFATQR DVSRTKRDIK TIAIKVRVQN NQQGKLVPGM TAEVLVPKSK QGGQ
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