Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4561 |
Symbol | |
ID | 4071506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 5407743 |
End bp | 5409065 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637986601 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_593635 |
Protein GI | 94971587 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.102367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.107463 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAATCCC TCTACATTGC GATCATCCTG GCCACCATTG CAGTCCTCGG CATTGCCATC GTCGGCAGCC AGGCCCTCTC GCAGGCGATG ATCGACGACT ACATCAACCC CACCTTCGAC GACATGGACG AAGTCTCCGT GCAAGAAGCC GCCGATAAGC TACAGACCAC GGGACCGCCC GCCGTCGCGG TCTACATGCA CCGCCTCGAT TCCGTCTTCG GCGGTTCGCA TTACCTGCTC GACGCCCGCG GCAACGATGT CGTCTCAGGC CAAAGCCTTT CGCGATACCT GCCCAAGCCG CCGCTCACCA AGGCGCGGGA GACCCATCAG CGAGAGTTCG TCATCGCGCA CCAATCCGCT GACGGCAAAT ACTGGTTTGT CGTCGTCGGC CCCTATCACC GTAAGGACCT CCCGTTCTAT CACTACAACT TCCTCATCCT CGGCACATGT CTCCTCATGT GCGGACTCGC AGCCTGGTAT GTCGTCTCGC CCATCCGCCG TATTTCCGCC GGAATCCGCC AGTTCGGCGA AGGCGATCTT GCGGTTCGTT TGCCGGTCCG CCGCCGTGAC GAAATCGGCA GCCTCGCGCA ATCCTTCAAC GGCATGGCCG AACGCATTCA AACCATTTTT TTGAGCGGTC AGCGCCTGCT CGCCGACATC TCGCATGAGC TGCGCTCTCC GCTCGCGCGC CTGCATTTCT CCGTCAAGCT CGCGCGTACC GCGCCTGACC GCGACGCCGC CCTCGATCGC GTCAAGCGCG ACATCGATCG CCTGACCACT CTCGTCTCCA GCTTGGTTGA GATCGCTCGC GCTGAAGGCA GCGCCGCCTA TCGCGCGTTT GAAGAAGTGT CCATTAACCA CCTCATCGCC GATACCGTCC GCGACTGTGC GGTTGAGATC GAGGCACGCG GAGGCCGCAT CCACCTTGCT GCCGCGCCCG GAGTCGTCGT GGTCGGAAGT TCTGAACTTC TGCGGCGCGC CGTCGAAAAT GTTTTGCGCA ACGCGATTCG CCACGCTCCG GAAGGCACTG CGATTGATGT CGAACTCGGC CTGCACGCGC AGATCGCAAC CATTTCCATC CGCGACTACG GCCCCGGCGT GCCCGAAGAA TTCGTCGAGA AGATCTTCGA CTCCTTCTTC CGCACCGAAG AAGCGCGTGA TGCCGACAGC GGTGGCGTCG GCCTCGGGCT CTCCATTGCC AAGCGCGCGG TGCAAGTTCA TCGTGGCGTA ATCCGTGCGA GCAATGCCAA TCCCGGCTTG CGCGTGGAAA TCGAACTGCC CGCCGAAGCC GCGTCGTTCG CGGGTGAAAC CGCGCGCGCG TAG
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Protein sequence | MKSLYIAIIL ATIAVLGIAI VGSQALSQAM IDDYINPTFD DMDEVSVQEA ADKLQTTGPP AVAVYMHRLD SVFGGSHYLL DARGNDVVSG QSLSRYLPKP PLTKARETHQ REFVIAHQSA DGKYWFVVVG PYHRKDLPFY HYNFLILGTC LLMCGLAAWY VVSPIRRISA GIRQFGEGDL AVRLPVRRRD EIGSLAQSFN GMAERIQTIF LSGQRLLADI SHELRSPLAR LHFSVKLART APDRDAALDR VKRDIDRLTT LVSSLVEIAR AEGSAAYRAF EEVSINHLIA DTVRDCAVEI EARGGRIHLA AAPGVVVVGS SELLRRAVEN VLRNAIRHAP EGTAIDVELG LHAQIATISI RDYGPGVPEE FVEKIFDSFF RTEEARDADS GGVGLGLSIA KRAVQVHRGV IRASNANPGL RVEIELPAEA ASFAGETARA
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