| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4541 |
|---|
| Symbol | |
|---|
| ID | 4070220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 5385169 |
|---|
| End bp | 5386107 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637986581 |
|---|
| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
|---|
| Protein accession | YP_593615 |
|---|
| Protein GI | 94971567 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000250612 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.557772 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACCT TTGTCCGTTC ATACGCGAAG ATCAATCTTG GGCTGCGCAT TGGGCCGCGG
CGCGCGGATG GGTTTCACGA TCTGCGCACG ATGTACACGA CGATCGCGTT GCACGAGCTT
GTTTCGGTTG AAGTCGAAGA CGGCGACGGG ATCGAGATCC GGTGTGACGA TCCGCGGGTG
CCTTGCGATT CGACGAATAC GTGCCACAAG GCGGCGGCGC TGGTGTTGGA GGCGCTCGGT
CTGCGCTCTA AGGTATTGAT TTCCATCGAG AAGCGGCTGC CGGTACAGGG TGGACTCGGG
GCAGCTTCTG GGAATGCGAT TGCGACGATT TTTGGGCTGG AGCGGATGCT GGGGAAGGAG
CTTTCGGCCA AAGAAAGGGC AGAGATTGCC GAGAAGATCG GATCCGACCT TAACTTGTTC
TTATACGGTG GGTTAACGTT GGGTACCGGG CGCGGCGAGG AGGTCTGGCC GCTGCCGGAT
TTGCCATCGC TGCCGCTGGT GATCGTGACG CCGGAGGTCG GAGTGTCGAC GCCGGTGGCA
TTTAAGGCGT GGGATTCATT GACCCATCCG GAGGGCTCCG TTACAATAAA TGAGTTCAAC
CATCTCGTTT ACGAGTGGTT GTCTGCATCC GGTGTTCCCG CCTTGAGCGG GGACCGGGCC
GAGACGCTGC TTCTCGACCT TGTCCGAACC GGGATTTCGA ACGACTTCGA ACGCGTTGTC
TTTCCAGAAA TTCCCGTATT ACGAGAGGTC AAGTGTGCGC TCGAGCGCGA AGGCGCTTTG
TATGCGTCGC TTTCCGGCTC AGGTTCAACC TTGTATGGGT TGTTTCGTTC GTCTGCGGAA
GCATCGACAG CGGCGGAGCG GTTGAACTCG AGCGGGCTGA AAGCGACGGC GACACAGACC
TTGCCGCGTG AGCAGTACTG GCGGGAAATG TTTCAGTAA
|
|---|
| Protein sequence | MSTFVRSYAK INLGLRIGPR RADGFHDLRT MYTTIALHEL VSVEVEDGDG IEIRCDDPRV
PCDSTNTCHK AAALVLEALG LRSKVLISIE KRLPVQGGLG AASGNAIATI FGLERMLGKE
LSAKERAEIA EKIGSDLNLF LYGGLTLGTG RGEEVWPLPD LPSLPLVIVT PEVGVSTPVA
FKAWDSLTHP EGSVTINEFN HLVYEWLSAS GVPALSGDRA ETLLLDLVRT GISNDFERVV
FPEIPVLREV KCALEREGAL YASLSGSGST LYGLFRSSAE ASTAAERLNS SGLKATATQT
LPREQYWREM FQ
|
|---|
| |