| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4523 |
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| Symbol | |
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| ID | 4070201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 5365752 |
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| End bp | 5367251 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637986562 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_593597 |
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| Protein GI | 94971549 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1956] GAF domain-containing protein
[COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.967133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.833222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACTCCGC AGCAGGGCAT GCAAAAAATC GCGATTCTCT ACGACGCGAG CCAGGCGGTT
CTCTCGACCT TCCAACTGGA TGAGGTCCTG AATCAGATCC TGGCCATCGT GCGCGATTAC
TTCCATTTGG AAGGCGCGTC GGTCCTGCTA TTTGACAAAG ACCGAACCGT TCTACGCGTG
CGACTGTCGT TCGGGAAACA ACCTAGCAGT ATGGAAGTTC CTCTTGGTAA AGGGCTTACA
GGCGCGGCCG TGCATCAGAA GAGGCCCATC TACTCTCCCG ATGTCACTAA GGACAAGCGC
TATATCTGCG CCGTGGAGAG CACCCGGTCG GAACTTGCCA TTCCCCTGAT GGTCCGCGAC
GAAGTGGTGG GGGTGCTCGA TTGCCAGAGC GATCAGGTGG ACTTTTTCGA TACGGAAACC
GAGGACTTAC TGACTCTCTT CGCGACTCAG GCGTCCATCG GCATCAGTAA CGCCAAGATT
TATTCACTGG AACAGAAGCG CGCCCTCCAA ATGAGCGCGA TCGGCGCCAT CGCGAGCAAG
GCCACGGCAT CGTTAAAGTT GGAAGAGTTG CTGGTGCAGC TCTGTATGGC GATCGCGACG
AACCTGGCGT TGGATGGGAT CTCTGTTCTC ACGTGTGAGC CCGATGGAAC GTTAATTCTC
CGCGCCCAGG AAGGGTCGTT GAAGCCGGTG ATCGAAACCA GTCAGGCTTT GTTGCCGGAG
GGGAATCCCG CGGAGCGCGC GCTGTCGCGG AAAAAGCCTG TCGTGCTTCA CCCCGATCTC
GACTCTCGAC CAGTGCTCTA CGAAGGCGCC GGTTCGGAGC TGATGCTGCC CCTGGTCTCC
GCTGGGAAAC CGCTTGGCAT GATCGTAATG GGGGCAAGGA GCGATACCGG CTTTCCGGAA
GAAGATATGC AGACGCTGGT GTCGGTGGCT GACATTTGTG CAACCGCCAT CCAAAACGCC
TTTTACTTCC AGCAAGTAGA AGCACTCGCT TACGTGGACG GCCTCACCGG CGTGTACAAC
CGCCGTTTTT TCGAGCGCAA GATCACCGAA GAACTCGAGC GGGCGGCCCG CTATGAAGGC
ACGCTTTCGG TGATCATGGT GGACATTGAT AACTTCAAGA AGGTGAACGA CGAGTTCGGT
CACCTGCTCG GCGACGAGGT GCTCCGCACC GTTGCACAGA TCTTCGCGGG TGCACTTCGC
AAGCCGGACC ACTGTTGTCG TTATGGTGGT GAAGAGTTCT CAATCATCCT TCCTGAAACA
TCGGGGCCAA AGGCTCTAAA AGTCGCAGAG AAGTTGAGAG GCTTGATAGC GGATTACGAT
TTCCCTGGCA TTCCTCGCCG GATAACGATC AGCGCCGGTG TAGCGGACTT CCCGACCTGC
GGTACAACCC GCGATGACAT CGTCGGCGCC GCTGACAACT GCTTGTACCT GGCGAAGCAA
TCGGGACGCA ATTGCGTGAT GTCGCCCTAC AACATGAATA CGCCGAAGTT GTTCACTTAA
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| Protein sequence | MTPQQGMQKI AILYDASQAV LSTFQLDEVL NQILAIVRDY FHLEGASVLL FDKDRTVLRV
RLSFGKQPSS MEVPLGKGLT GAAVHQKRPI YSPDVTKDKR YICAVESTRS ELAIPLMVRD
EVVGVLDCQS DQVDFFDTET EDLLTLFATQ ASIGISNAKI YSLEQKRALQ MSAIGAIASK
ATASLKLEEL LVQLCMAIAT NLALDGISVL TCEPDGTLIL RAQEGSLKPV IETSQALLPE
GNPAERALSR KKPVVLHPDL DSRPVLYEGA GSELMLPLVS AGKPLGMIVM GARSDTGFPE
EDMQTLVSVA DICATAIQNA FYFQQVEALA YVDGLTGVYN RRFFERKITE ELERAARYEG
TLSVIMVDID NFKKVNDEFG HLLGDEVLRT VAQIFAGALR KPDHCCRYGG EEFSIILPET
SGPKALKVAE KLRGLIADYD FPGIPRRITI SAGVADFPTC GTTRDDIVGA ADNCLYLAKQ
SGRNCVMSPY NMNTPKLFT
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