Gene Acid345_4517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4517 
Symbol 
ID4070195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5359359 
End bp5360438 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content55% 
IMG OID637986556 
Producthypothetical protein 
Protein accessionYP_593591 
Protein GI94971543 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTAGTC AGAAACAAGT CCGTTGGGCG CAACTTCGCG TAGGCATTAC GGTTATCTTT 
GCGACAGCTA CGCTTTGCGT CCTGATCTTC CTGATGTCGG GGACCTCCGG CATCTTCACC
CGGAAGGTAA CGCTCGTGGT TTATCAGGAC AACGCTGGCG GCCTGCGCAT TGGCGCACCG
GTTCGCCTGC AGGGCGTGGA CATTGGCAAT GTCACCAGCA TCGGCGTGGT GACCGATCCG
AATCATCCAG CCGATCCTGT CCAGATCAAG TTCAAGATCT CCAGCAAGTT CCAGCCGCTC
GTCCATCTCG ATGCCACGGC GACGCTTGCG ACCGCTGGTG TTTTGGGCGA GACGTTTGTA
GACATCGATA GCCGCCAAAC AAAGGACCGC ATGGTTAAAG ATGGCGACAT TCTCAAGTCG
AAAGATGAGC CTTCATTTAA TGATGTCGTG AAATCCACCC AAGGCACCCT GCAAAACGTA
GATGTTCTCT TGCAGCGCGC CGACCGCATT TTTGCCTTCA TCGAAAGCGG CCAGGGCTCC
ATCGGCAAGT TGATCTACGA CCAGGAACTG TATAACCGCC TGAATTCCAC GCTCAACGAA
GTACAAGCGA TGGTTAACCA GATCAGCTCA GGCAAGGGCT CGATCGGCAA ACTGATCAAC
GATGACGAGC TTTACAACAA AGCGAACGCG TCCGTCGATA AGCTCGCCAA GATCATCGAC
GAGATAGACA AAGGCGAAGG CACCATTGGC AAGCTGCTGA AGGACCCTAG CCTGTATAAC
AACGCTAACG AGACGATCAC GAAGGCGAAT TCGTTGATCG GCGACATCAA CCAGGGCAAG
GGCGCGCTCG GCAAGTTCGC GAAAGACGAA GCGTTCGCGA AGAAGCTCGA CGATACGATG
TCGCATCTCG CAAGTATTTC CGCCAAGATC GACAATGGCG AGGGCAGCGT CGGCAAGCTG
ATGAATGACC CAGCGCTGTA TAACAACACC GATCAGGCCC TCGTCGAAAC GAGGCACCTG
TTGCAGGCCA TTCGTGAGAA CCCGAAGAAG TACCTCACCT TCCACGTGAA GGTCTTCTAA
 
Protein sequence
MPSQKQVRWA QLRVGITVIF ATATLCVLIF LMSGTSGIFT RKVTLVVYQD NAGGLRIGAP 
VRLQGVDIGN VTSIGVVTDP NHPADPVQIK FKISSKFQPL VHLDATATLA TAGVLGETFV
DIDSRQTKDR MVKDGDILKS KDEPSFNDVV KSTQGTLQNV DVLLQRADRI FAFIESGQGS
IGKLIYDQEL YNRLNSTLNE VQAMVNQISS GKGSIGKLIN DDELYNKANA SVDKLAKIID
EIDKGEGTIG KLLKDPSLYN NANETITKAN SLIGDINQGK GALGKFAKDE AFAKKLDDTM
SHLASISAKI DNGEGSVGKL MNDPALYNNT DQALVETRHL LQAIRENPKK YLTFHVKVF