| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4516 |
|---|
| Symbol | |
|---|
| ID | 4070194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 5357140 |
|---|
| End bp | 5359194 |
|---|
| Gene Length | 2055 bp |
|---|
| Protein Length | 684 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637986555 |
|---|
| Product | PgPepO oligopeptidase |
|---|
| Protein accession | YP_593590 |
|---|
| Protein GI | 94971542 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3590] Predicted metalloendopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.861511 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATCC CTAAGATCGT TGGCATTTTT CTTCTGTGCG GCGCGGCTGC CTTTGCCCAA
ACGTCCACAG ATTCAGCTAA GCCACCTGCG CCCGAAAAAA TCTTGAGCTT CGATGTCGAG
GCAATCGACA CGAGCGTTAA CCCTTGCGAG AACTTCTATC AGTTCGCCTG TGGCAACTGG
AAAAAGACCA ACCCCATTCC CGGCGACCAG ACCCGATGGG GACAGTTCAA CAAGCTCGCC
GAGAACAATC GGCTGGTTCT TTATGAATTG CTGACCAGCG CCGCGAAGCC CGGAAAGCAC
AACCCCATCG AACAAAAAGT CGGCGATTAC TTCGCGGCTT GTATGGACAC TAAGACCATC
GAAGCCCGCG GAGCGGAGCC GCTAAAGGCA CAGCTCGACG CCATCTCCAA GATCTCGAAC
CGCACCCAAC TCATGGAAGC AGTCGCGAAC CTGCAGCAGA ACGGCGTCCG AACTTTGATG
GCCTTCTACG CCTCGGCCGA TATGCACGAC GCCACCACGC AGGTTGCCAA CATCGACCAG
GGTGGCATCA CTCTTCCCGA CCGCGATAAC TACCTGAAGG ATGACGCTGC CAATGTCGAA
ATGCGCGCCA AGTATCTCGA ACACGTACAG AAGATGTTCG AACTTCTCGG CGACAGCTCC
GACACTGCGA AGAAAGAAGC GCAGACGGTC ATGACGATCG AGACTGCGCT GGCTAAGGCC
TCGATGGACC GCACCTTGCG CCGCGATCCC AAGAACCGCG ACCACATGAC CGAAGTTTCC
GTAGCTGAGA AGGACGCTGC GAACCTGGAA CTCGCCAAGT TCTTCGCAAC CACAAAGGCC
CCTGAGTTCA GCAAGGTCAA CGTCGGCAAT CCGGACTTCT TCAAGCAGAT CAACGACCTC
GTCGCTGGCA CTCCGGTTGA CGACATGAAG GTCTACCTCC GCTGGAAGGC GCTGCACGAT
GGCGCGTCTG CGCTCTCCGA TAAGTTCGTG AATGAGGATT TCAACTTCTT CAACGCCTAT
TTGCGCGGCC AGAAAGAAAT CGCGCCGCGC TGGAAGCGTT GCGTGGAATA CACCGACGGT
TCGCTCGGCG AGGCCCTTGG CCAGCTCTAT GTCGAGAAGG TCTTCGGCAA AGAGCAGAAG
GAGCGCACCC AGAAGATGGT GAAGGCGATC GAAGAAGCCA TGAACGACGA CCTCAAGTCG
CTCGAATGGA TGACGCCCGA AACCAAGAAG GCTGCCTACA CCAAGCTCGA ATCCATCGTG
AATAACATTG GCTATCCCGA GAAGTGGCGC GATTACAGCT CGGTGAAGGT CACGCGCGAC
GACTTCTTCG GTAACTCCCA GCGCGCCGAT TATTTTGAAG TCCACCGCAA CTGGAACAAG
ATCGGCAAGC CCACCGACAA GAAAGAATGG GGAATGACCC CTCCGACGGT GAACGCCTAC
TACAATCCAT CGCGCAACGA CATCAACTTC CCAGCCGGCA TCTTGCAGTC GCCGTTTTAC
GCCGGCGGCG CGGATGACGC CGTGAACTTG GGCGGCATCG GCGTGGTGAT CGGACACGAA
CTTACGCACG GCTTCGACGA CCAGGGCCGC AAGTTCGATG CGCAGGGCAA TCTTCGCGAT
TGGTGGACCG CGGAAGACGG CAAGGCCTTC GAAGAGCGCG CCAAGTGCGT TTCCGATGAG
TACTCCAGCT TCGTCTCCGT GAAGGACGAC AAAGGAGAAG TTCATCTCAA CGGCAAACTC
ACACTCGGCG AGAATACCGC CGATAACGGT GGACTTCGCC TCGCCTACGC TGCCCTGATG
AAGCTGATCA ACAACGACGA TTCGAAAAAG GTTGACGGCT ACACGCCCTC GCAGCGCTTC
TTCATCTCGT TCGCGCAGGT CTGGTGCCAG AACGTAACGC CTCAGCAAGC GCGCCAATTG
GCTCTTGTCG ACCCACACTC TCCGGGTGAG TGGCGCGCCA ACGGCACTGT CCGCAACTTC
GAGGGCTTCT ACAAGGCCTT CGGCTGCAAA GAAGGCCAAC CGATGGTTCC CACTCAGGGC
TGCCGCGTTT GGTAA
|
|---|
| Protein sequence | MQIPKIVGIF LLCGAAAFAQ TSTDSAKPPA PEKILSFDVE AIDTSVNPCE NFYQFACGNW
KKTNPIPGDQ TRWGQFNKLA ENNRLVLYEL LTSAAKPGKH NPIEQKVGDY FAACMDTKTI
EARGAEPLKA QLDAISKISN RTQLMEAVAN LQQNGVRTLM AFYASADMHD ATTQVANIDQ
GGITLPDRDN YLKDDAANVE MRAKYLEHVQ KMFELLGDSS DTAKKEAQTV MTIETALAKA
SMDRTLRRDP KNRDHMTEVS VAEKDAANLE LAKFFATTKA PEFSKVNVGN PDFFKQINDL
VAGTPVDDMK VYLRWKALHD GASALSDKFV NEDFNFFNAY LRGQKEIAPR WKRCVEYTDG
SLGEALGQLY VEKVFGKEQK ERTQKMVKAI EEAMNDDLKS LEWMTPETKK AAYTKLESIV
NNIGYPEKWR DYSSVKVTRD DFFGNSQRAD YFEVHRNWNK IGKPTDKKEW GMTPPTVNAY
YNPSRNDINF PAGILQSPFY AGGADDAVNL GGIGVVIGHE LTHGFDDQGR KFDAQGNLRD
WWTAEDGKAF EERAKCVSDE YSSFVSVKDD KGEVHLNGKL TLGENTADNG GLRLAYAALM
KLINNDDSKK VDGYTPSQRF FISFAQVWCQ NVTPQQARQL ALVDPHSPGE WRANGTVRNF
EGFYKAFGCK EGQPMVPTQG CRVW
|
|---|
| |