Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4495 |
Symbol | |
ID | 4070173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 5334938 |
End bp | 5336494 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637986534 |
Product | D-alanyl-D-alanine carboxypeptidase |
Protein accession | YP_593569 |
Protein GI | 94971521 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.9123 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCGCT CGCGGACCAT TCCGGCTCTC TTCTTCCTCG TTCTCATCGC GCTGTACGCG CCTGCGGCCG ACAAACTCTC GTCGAAGATC GACAGAGTCC TCTCCGCGCC CGACGTCTCA CGCGCATTCT GGGGCATCGA GATCGTCTCG CTCGACAACG GCAAAACGCT CTATTCGCGC AACAGCGACA AGCTCTTTAC GCCCGCATCC AACACCAAGC TCTTCACCAC CTCGACAGCG TTCGCGCTGC TCGGTCCCGA CTTCCGCTTC CATACCACGG TCGAGACCTC AGGCACAGTC GACAAGCGTG GCCGCCTCGA TTCTGACCTC GTCATTGTGG GTCGCGGCGA TCCGAACCTC TCCGGTCGTA CTCTGCCCTA CAACCTGCGC ACCGAACGTA AGCAACCGCC GATTGCTGCG CTCGAGAACC TCGCCGACCA GCTCGTCCAA AAGGGCGTTC GCTACGTAGA TGGCGACATC GTTGCCGACG ACTCCTACTA CGCCTTCGAG CGCTACGGTG AAGGGTGGGC GCAGGATGAC CTTGTCTGGG AGTGGGGAGC GCCGGTATCA GCGCTGACCG TCAATGACAA CGTGATCTTC GTCAGCATTC AGCCCGCCGA TCGCGTCGGC GAACGCGCCT TTGTGGACAT CACTCCGTTT CCGGCGTACT ACCGCGTGGA CAACCGCGTT ATGACCACTC CACAGGGAAC CGGCCCGCGC AAGATCTACA TCAACCGTGA GCCGGGTTCG AACCAGCTCA CGTTGTGGGG GAACATTCCG GTCGATGACC AGGGCGCTAA CGAAGCGCTT GCCATCGAAG ACCCTGCCGA CTTCACCGCG AAGCTCTTCC GCGAACTCCT CGACAAGCGC GGCGTCACCG TATACGGACG CCCGAAGACC AAGCACACCG AGTTGGCATC GCTCTCCACG TTCAGCATCA CCGCGACGGC CTCAGCCGGA GGCGGCGCCG ATCGCGCGCC CGCTCCGGTT TCACGCCTGC CTCTGGTGCT CGGACAGTAC GATTCGCAGC CGCTCTCCGC CGATCTCAAA GTCATCAACA AGGTCAGCCA GAACCTTCAC GCCGAATTAC TGCTGCGTTT GCTCGGCAAG GAGAAGGGAA CTGCCGGCAC GATCGAAGGC GGCCTCGAAG TTGAGCGGGC CTTCCTCGCC TCCGCCGATA TTCGTCCCGA GGAATACACG CTCTACGACG GAAGCGGTCT TTCACGGCAG GACCTCGCCA CGCCGCACGC GTTCGTGAAG CTCCTGACCT ACGCGCACAA GCAACCATGG GGCGCGACCT TCGAGGATAC GCTGCCCGTC GCAGGTGTGG ACGGTTCGCT CGTGGAACGC TTTACCAAGT CGACCGCGCA AAGCCGCGTA CACGCCAAGA CCGGTTCTCT CGACCATGTG AATTCGTTGT CGGGCTATTT AACTACCGAG AAGGGCGAGC ACGTGGTGTT CTCGATCCTG TCGAACAACC ACAACCTCAC CAACAAGCAT GCCATTGAGA CGATCGACGC GATTGTGCAG GCGGTCGTGG ATAGCGGGAA GAAGTAG
|
Protein sequence | MSRSRTIPAL FFLVLIALYA PAADKLSSKI DRVLSAPDVS RAFWGIEIVS LDNGKTLYSR NSDKLFTPAS NTKLFTTSTA FALLGPDFRF HTTVETSGTV DKRGRLDSDL VIVGRGDPNL SGRTLPYNLR TERKQPPIAA LENLADQLVQ KGVRYVDGDI VADDSYYAFE RYGEGWAQDD LVWEWGAPVS ALTVNDNVIF VSIQPADRVG ERAFVDITPF PAYYRVDNRV MTTPQGTGPR KIYINREPGS NQLTLWGNIP VDDQGANEAL AIEDPADFTA KLFRELLDKR GVTVYGRPKT KHTELASLST FSITATASAG GGADRAPAPV SRLPLVLGQY DSQPLSADLK VINKVSQNLH AELLLRLLGK EKGTAGTIEG GLEVERAFLA SADIRPEEYT LYDGSGLSRQ DLATPHAFVK LLTYAHKQPW GATFEDTLPV AGVDGSLVER FTKSTAQSRV HAKTGSLDHV NSLSGYLTTE KGEHVVFSIL SNNHNLTNKH AIETIDAIVQ AVVDSGKK
|
| |