Gene Acid345_4486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4486 
Symbol 
ID4070970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5327603 
End bp5328517 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content60% 
IMG OID637986525 
ProductDMT family permease 
Protein accessionYP_593560 
Protein GI94971512 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCTGA GCACGCAGAC GTCCGTCAAC ACTGCTCCCA CCCGTGGCTC TGCGGGGGCG 
CTCGCGATTA CTGCGCTGGT GCTGTCGGGG TGCTGCTGGG GGACGGGCTT CCTCTTCGGG
AAGATCGCGC TCGAGCAAAT GAGCGTGACC GAGAATGTCG CGTGGCGATT CATTTTCGGA
TCGCTGGGTT TATTGCCGAT CATTTTTCTG CGGTGGCAGC CCTATACGCG GCGCGATTGG
GTGAGCCTGC TGATCGCGAG TTTCGTCGGT GTGCCAATCC AGTTCCTGAT CCAGTTCAAG
GGGTTGCAGC TCACGACCGT CTCGCATGCG TCGTTGATGA TCGGGACCTT GCCGATCATG
CTGGCGATGA GTTCGGTGAT ATTTCTCGGC GAACGTTTGC ACTGGCAGGA ATGGTTCTCG
CTTGCAATCG CGACTTTCGG GGCCGTGCTG ATTGCGCTCT CACACGGGAA TGGGGTTGGC
AGTCCGCAAG CAAGCGTCGT AGGAGATGTC CTCGTTGTGC TCTCGCTGCT GGCCGCGGTG
GTGATGGTGA TGATCACGAA GAAGCTGATT GGACGACACG ATTCGCTGCA CGTGACCTCG
ATGATGATCG TGCTCGGGAC CCTGATGCTG ATTCCCTGGG CGGTCCTGAC GCATCCGATG
CGCTTCGATT TCAGTACGAG TACGTGGATC GGGGTTGCCG CCCAAGGGTT TATCGCGACC
TCTGGCGCCT ACCTGCTTTG GAACTGGGGA TTGGCGAAGG TTCCAGCGTC GCGCGCTGGG
GTGTTTCTGA ACATGGAGCC GCTGGTGGGA GCATTACTCG GCGTCACGGT TCTGCATGAG
CATCTTGGAT GGCCCGCACT GCTCGGCGGG GCCATGGTGG TCGGAGCTGC GATTCACTTC
AGCAAGACTT CCTAG
 
Protein sequence
MNLSTQTSVN TAPTRGSAGA LAITALVLSG CCWGTGFLFG KIALEQMSVT ENVAWRFIFG 
SLGLLPIIFL RWQPYTRRDW VSLLIASFVG VPIQFLIQFK GLQLTTVSHA SLMIGTLPIM
LAMSSVIFLG ERLHWQEWFS LAIATFGAVL IALSHGNGVG SPQASVVGDV LVVLSLLAAV
VMVMITKKLI GRHDSLHVTS MMIVLGTLML IPWAVLTHPM RFDFSTSTWI GVAAQGFIAT
SGAYLLWNWG LAKVPASRAG VFLNMEPLVG ALLGVTVLHE HLGWPALLGG AMVVGAAIHF
SKTS