Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4471 |
Symbol | |
ID | 4070954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 5305801 |
End bp | 5306643 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637986510 |
Product | HemK family modification methylase |
Protein accession | YP_593545 |
Protein GI | 94971497 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2890] Methylase of polypeptide chain release factors |
TIGRFAM ID | [TIGR00536] HemK family putative methylases [TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.44182 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCTCA AGCAAGCCTT CGACTCCGCA CTTAAGCATT TAGAAGCAGC CGACACTCCT TCCCCTCGCC TGAGCGCCGA GCTCTTGCTG ATGTTCAGTT TGAATTGCGA TCGCGCTTAT CTCTTTACCT ATCCCGAGCG CGAACTCACC GCCGACGAAC AGGCCCGCTA CGACGAAGCC ATCGCCCGCC GCTGTCATGG CGAGCCCGCG CAATACATCA CCGGACACCA GGAGTTCTAT GGTCGCGACT TCCTCGTCTC GCCGGCGGTG CTCATCCCGC GCCCTGAAAC CGAGCACCTG ATCGAAGCCG TGCTCGAACT CGCGCCACGC GAGGTGCGTT GGGAAGTCCT CGATGTTGGA ACCGGCTCCG GCTGCATTGC CGCAACGCTT GCCAAAGAAT TTCCGCGGAT GAAAGTCACG GCCGTCGATA TCTCGCCCGA AGCGCTCCAG ATTGCACAAG CCAATGCCGC CCGCCTCGAA GCTCAAGTCG AGTTTCGTGT GAGCGATCTA CTCAGCGCGA TCGAACCCGG ACGCCAGTTC GACATGATCG TCTCCAACCC GCCCTACGTC GGCGAGTGCG AGGCTGACAA AGTCCAGCGC CAGGTGAAAG ACTTCGAGCC GCACTGCGCC GTCTTCGGCG GCGAGCGCGG CATGGACATC ATCAAGCGTC TGGCGCCGCA GGTTTGGGAG CACCTCAAAC CGGGCGGCTG GTTCCTAATG GAAATCGGGT ACTCCATCGC CGATCCCGTC CACGAAATCA TGCGCGACTG GACCAACTTC AAGGTCGTCC CCGACTTGCG AGGCATCCCG CGCGTTGTCG TCGGCCGCAA ACCAACTTCT TAA
|
Protein sequence | MTLKQAFDSA LKHLEAADTP SPRLSAELLL MFSLNCDRAY LFTYPERELT ADEQARYDEA IARRCHGEPA QYITGHQEFY GRDFLVSPAV LIPRPETEHL IEAVLELAPR EVRWEVLDVG TGSGCIAATL AKEFPRMKVT AVDISPEALQ IAQANAARLE AQVEFRVSDL LSAIEPGRQF DMIVSNPPYV GECEADKVQR QVKDFEPHCA VFGGERGMDI IKRLAPQVWE HLKPGGWFLM EIGYSIADPV HEIMRDWTNF KVVPDLRGIP RVVVGRKPTS
|
| |