| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4453 |
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| Symbol | |
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| ID | 4070936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 5285124 |
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| End bp | 5286371 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637986492 |
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| Product | RNA polymerase ECF-subfamily sigma factor |
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| Protein accession | YP_593527 |
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| Protein GI | 94971479 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTCA GGGATGTCCC CACAGCAGTC GAAGAAGTGT ATCGCTCCGA GTGGGGGCGT
GTCGTCGCGA CCCTCATTGG AATGCTCGGC GGAGACTTTG ATTTGGCCGA GGAAACCGCG
CAGGAGGCCT TTGCCGCCGC CGTAACCCAG TGGGAGAAAG ACGGCGTTCC TGAGTACCCA
CGGGCTTGGA TCATCTCTAC CGCGCGCCAC AAGGCCATCG ACCGGATCCG CCGCAAGGCT
AAATTTGAAG AGGAACTCGA GCCGCGCCTC GAACAGGGAA CTCTCGACGT CGCGACCCCC
CCACAGGAGT ACACCGCCGA GATTCCTGAC GACCGACTGC GCCTGATCTT CACTTGCTGC
CACCCGGCGC TGGCCTTGGA CGCGCAGATC GCACTTACAT TGCGCACGCT TTGCGGACTC
GAGACCGAAG AGATCGCGCG CGCCTTTCTC GTGCCAGTGC CGACGATGGC GCAACGAGTG
GTCCGCGCCA AGAGCAAGAT TCGTGACGCC GGCATTCCGT ATGCCGTCCC CGAGACGAGC
CAGATGGCGG AGCGCCTCGA TGCGGTGTTG CACGTGATTT ACCTGGTCTT CAACGAGGGC
TACTCAGCGT CGTCCGGCGA GTCGCTCACG CGCGCCGATC TTTCTGAAGA AGCGATTCGG
TTGGCGCGCA TCGTCGTAGA GTTGCTGCCC GATCCCGAAG CGCTGGGCTT GCTTTCGCTG
ATGCTGTTGC ATGAATCGCG CCGCGCCGCA CGCACCTCCG AAGACGGTGA CATGATCCTG
CTCAACGATC AGGACCGCAC GCTGTGGGAC CGCGCACTGA TCGCCGAAGG TACTGCGTTA
GTCGAGCGTT CCTTCGCGCT GCGGCGTCCC GGGCCTTACT CGATTCAAGC TGCCATCGCC
GCGGTCCATG CCGACTCTCC AACTCCCGAT GCCACCGACT GGCGCCAGAT CGTCGCTCTC
TACGATCTCT TGTTGCAGGT TGTCGCCTCG CCCGTCATCG AATTGAATCG CGCTGTAGCG
GTGGCCATGC GAGACGGTGC TCCGGCCGGC CTTGCCGTAA TCGATACGAT TCTCGCTCGC
GGTGATCTCG CGAACTATCA CCTCGCATAC TCCGCCCGCG CCGACATGCT GCGTCGTATC
GGCAAAAAAT CCGAAGCCCG TAAAGCTTAC GAACGTGCCC TGGCGCTGAC CCAGCAGGCA
CCGGAACAGA GATTTTTGAG GAAGAGAATT GCGGAAGTAT CTGGGTGA
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| Protein sequence | MSLRDVPTAV EEVYRSEWGR VVATLIGMLG GDFDLAEETA QEAFAAAVTQ WEKDGVPEYP
RAWIISTARH KAIDRIRRKA KFEEELEPRL EQGTLDVATP PQEYTAEIPD DRLRLIFTCC
HPALALDAQI ALTLRTLCGL ETEEIARAFL VPVPTMAQRV VRAKSKIRDA GIPYAVPETS
QMAERLDAVL HVIYLVFNEG YSASSGESLT RADLSEEAIR LARIVVELLP DPEALGLLSL
MLLHESRRAA RTSEDGDMIL LNDQDRTLWD RALIAEGTAL VERSFALRRP GPYSIQAAIA
AVHADSPTPD ATDWRQIVAL YDLLLQVVAS PVIELNRAVA VAMRDGAPAG LAVIDTILAR
GDLANYHLAY SARADMLRRI GKKSEARKAY ERALALTQQA PEQRFLRKRI AEVSG
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