| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4415 |
|---|
| Symbol | |
|---|
| ID | 4073321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 5243208 |
|---|
| End bp | 5244371 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637986448 |
|---|
| Product | peptidase S1 and S6, chymotrypsin/Hap |
|---|
| Protein accession | YP_593489 |
|---|
| Protein GI | 94971441 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAAGA TGCTCCGTCC CTTTCTTCTC GGCGTTTTGC TTGCCACTGG TTTTTTCTAC
CTGACCACGC ACCATCGCGC CGCCAGCGCC GGTTCCGACG TCGACAACGT CTGGATCTCG
CGTCCCGACC GCCTCGAGCT GACCCAGGCC GCCGGCCCCG TCACCTACGA CCCCGAAGAG
CAGGTCAACA TCGAGGTCTA TAAAAGAGGT CTGCCCAGCG TCGTGAACGT CACCTCCACG
ACGGTCGCCT TCGACTTCTT TTATGGCGCG GTGCCGCAAG AGGGCCAGGG CTCCGGCTTC
ATCATTGATA AGCAGGGCCA TATCCTGACG AACTTTCACG TCGTCCAGGG CAATCCGCAG
AAGCTGGAAA TCACCCTCAG TAATCGCAAG AAATATCCAG CCAAGGTTAT TGGCCTCGAC
CGCTCGCACG ATCTCGCGGT CGTCCAGATC AACGCCCCTG ACCTCGTACC CGCCGTCATG
GGCGACAGTC ACGGTCTCGT TGTCGGCCAG AAGGTCTTCG CCATCGGCAA TCCCTTTGGC
CTCTCCGGTA CCATGACCCG CGGCATCATC AGCTCCATCC GCGCCATCGT CGAGCCCGAC
GGCACCAAGA TCGACGAAGC CATCCAGACC GACGCCGCCA TCAACCCCGG CAACTCCGGC
GGTCCGCTGC TCAACTCGCG CGGTGAAGTC ATCGGCATTA ACACCATGAT TGCCAGCAAC
GGCGCCGCAC AGAGCGCCGG CATCGGCTTC GCTGTCCCCA TCAACGCGGC CAAAGCCGTG
CTCAATGACC TCGTGCAGTA CGGCGAAGTC CGCCGTCCGT CGCTCGGAAT CCGCGGCGGG
CTGCCGATCA CACCCGAGCT CGCCGAACAA ATGGGCCTCG CCGCCGACTA CGGCGTCCTC
ATCCAGGCCG TAATCCCCGG TCGTGGCGCC GACAAAGCAG GACTGAAAGG CGGCAACGAG
CGCGCCTATC TCGGCAACAC GCCGATCATG ATCGGTGGTG ACCTCATCGT AGCCATCGGC
GACGAGCAGA TCGCGGACCT GCAGGACCTG TCGCACGCCA TGAACGCCCA CAAAGCGGGC
GAGACGGTGC GGGTCACCAT CTACCGCGCC AAACGCAAAA TGGTAGTCCC CGTCCAGCTA
GACGAGGCCC GCCAAGGCGC ATAA
|
|---|
| Protein sequence | MRKMLRPFLL GVLLATGFFY LTTHHRAASA GSDVDNVWIS RPDRLELTQA AGPVTYDPEE
QVNIEVYKRG LPSVVNVTST TVAFDFFYGA VPQEGQGSGF IIDKQGHILT NFHVVQGNPQ
KLEITLSNRK KYPAKVIGLD RSHDLAVVQI NAPDLVPAVM GDSHGLVVGQ KVFAIGNPFG
LSGTMTRGII SSIRAIVEPD GTKIDEAIQT DAAINPGNSG GPLLNSRGEV IGINTMIASN
GAAQSAGIGF AVPINAAKAV LNDLVQYGEV RRPSLGIRGG LPITPELAEQ MGLAADYGVL
IQAVIPGRGA DKAGLKGGNE RAYLGNTPIM IGGDLIVAIG DEQIADLQDL SHAMNAHKAG
ETVRVTIYRA KRKMVVPVQL DEARQGA
|
|---|
| |